RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 C9orf72Q96LT7 481 aa16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 RNF208Q9H0X6 261 aa16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 TIMM13Q9Y5L4 95 aaPredicted RBP16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 CDY2AQ9Y6F7 541 aa16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 PQBP1O60828 265 aaKnown RBP16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 NFKBIAP25963 317 aa16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 STAT4Q14765 748 aa16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 OR5B17Q8NGF7 314 aa16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 SHISA4Q96DD7 197 aa16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 L3MBTL3Q96JM7 780 aaPredicted RBP16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 TLR10Q9BXR5 811 aa16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 NEU2Q9Y3R4 380 aa16.54■□□□□ 0.24
TMEM30A-201ENST00000230461 A0A0B4J269 797 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 BRAFP15056 766 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 TNFSF9P41273 254 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 SESN2P58004 480 aaPredicted RBP16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 FAM71AQ8IYT1 594 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 BSNDQ8WZ55 320 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 ANKRD7Q92527 254 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 MFSD14AQ96MC6 490 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 ADAM2Q99965 735 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 AVENQ9NQS1 362 aaPredicted RBP16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 ARHGAP28Q9P2N2 729 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 HES2Q9Y543 173 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 F9P00740 461 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 NFICP08651 508 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 MCL1Q07820 350 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 NFIL3Q16649 462 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 TAF1BQ53T94 588 aaPredicted RBP16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 MDH1BQ5I0G3 518 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 FAM172AQ8WUF8 416 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 MAML3Q96JK9 1138 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 KRT82Q9NSB4 513 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 BAZ2AQ9UIF9 1905 aaKnown RBP16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 KCNA3P22001 575 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 ZNF268Q14587 947 aaPredicted RBP16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 CTXN3Q4LDR2 81 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 OVOS1Q6IE37 1185 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 MSL3Q8N5Y2 521 aaKnown RBP16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 STKLD1Q8NE28 680 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 EXD1Q8NHP7 514 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 AGAP3Q96P47 875 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 C2CD2LO14523 706 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 EPHB2P29323 1055 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 IRX4P78413 519 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 IFT88Q13099 833 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 ZCWPW2Q504Y3 356 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 NUGGCQ68CJ6 796 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 RAB44Q7Z6P3 723 aaPredicted RBP16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 ARHGAP18Q8N392 663 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 MCUQ8NE86 351 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 BRI3BPQ8WY22 251 aa16.53■□□□□ 0.24
TMEM30A-201ENST00000230461 ZC3H4Q9UPT8 1303 aaKnown RBP16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 FBXO21O94952 628 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 ALDH2P05091 517 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 ALDH1A3P47895 512 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 ELAVL2Q12926 359 aaKnown RBP16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 TTC31Q49AM3 519 aaPredicted RBP16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 TFDP3Q5H9I0 405 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 EPM2AIP1Q7L775 607 aaPredicted RBP16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 TRPV6Q9H1D0 765 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 ACP6Q9NPH0 428 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 ATP11BQ9Y2G3 1177 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 COL1A2P08123 1366 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 H7C4K7 107 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 GPC4O75487 556 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 MMP3P08254 477 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 ACAT1P24752 427 aaKnown RBP16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 STIP1P31948 543 aaKnown RBP16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 PPP2R2AP63151 447 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 MRPS6P82932 125 aaKnown RBP16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 ANKMY2Q8IV38 441 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 ATPAF2Q8N5M1 289 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 TRPC7Q9HCX4 862 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 AAASQ9NRG9 546 aa16.52■□□□□ 0.24
TMEM30A-201ENST00000230461 C3orf70A6NLC5 250 aaPredicted RBP16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 HMGCRP04035 888 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 ARF4P18085 180 aaPredicted RBP16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 PPARGP37231 505 aaPredicted RBP16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 MAP3K7CLP57077 242 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 C10orf120Q5SQS8 335 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 CEP120Q8N960 986 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 ATG4AQ8WYN0 398 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 WDCPQ9H6R7 721 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 CATSPERBQ9H7T0 1116 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 PFDN4Q9NQP4 134 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 LSM7Q9UK45 103 aaKnown RBP16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 PPM1EQ8WY54 764 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 CYTH2Q99418 400 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 RASSF4Q9H2L5 321 aa16.52■□□□□ 0.23
TMEM30A-201ENST00000230461 UNCXA6NJT0 531 aa16.51■□□□□ 0.23
TMEM30A-201ENST00000230461 SMAPO00193 183 aa16.51■□□□□ 0.23
TMEM30A-201ENST00000230461 NNMTP40261 264 aa16.51■□□□□ 0.23
TMEM30A-201ENST00000230461 PAPOLAP51003 745 aaKnown RBP16.51■□□□□ 0.23
TMEM30A-201ENST00000230461 SPIRE1Q08AE8 756 aa16.51■□□□□ 0.23
TMEM30A-201ENST00000230461 PDK2Q15119 407 aa16.51■□□□□ 0.23
TMEM30A-201ENST00000230461 ZNF280DQ6N043 979 aa16.51■□□□□ 0.23
TMEM30A-201ENST00000230461 DEFB128Q7Z7B8 93 aa16.51■□□□□ 0.23
TMEM30A-201ENST00000230461 PPFIBP2Q8ND30 876 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms