RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 GRIP2Q9C0E4 1043 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 SAP130Q9H0E3 1048 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ADAM7Q9H2U9 754 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 MOV10Q9HCE1 1003 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 DDX18Q9NVP1 670 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 SNTG2Q9NY99 539 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ADD3Q9UEY8 706 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 EGFL7Q9UHF1 273 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 APOBEC2Q9Y235 224 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 MYH2Q9UKX2 1941 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CLRN2A0PK11 232 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 GPC4O75487 556 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ALX3O95076 343 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 FUCA1P04066 466 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CALM1P0DP23 149 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CALM2P0DP24 149 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CALM3P0DP25 149 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ESRRAP11474 423 aaPredicted RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 CTNNA1P35221 906 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 PAFAH1B1P43034 410 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 BTDP43251 543 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 SNAP25P60880 206 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 NOP14P78316 857 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 MRPL28Q13084 256 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 KHDC1Q4VXA5 237 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 C6orf132Q5T0Z8 1188 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 NT5DC1Q5TFE4 455 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 FCRLBQ6BAA4 426 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CORO6Q6QEF8 472 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 INTS8Q75QN2 995 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 PAF1Q8N7H5 531 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 CFAP36Q96G28 342 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 NUP88Q99567 741 aaPredicted RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 TBC1D10AQ9BXI6 508 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 IFIH1Q9BYX4 1025 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 RUBCNLQ9H714 662 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 EPB41L5Q9HCM4 733 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 SRA1Q9HD15 236 aaKnown RBP5.97□□□□□ -1.45
RFX4-201ENST00000229387 GGT7Q9UJ14 662 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 HPSEQ9Y251 543 aa5.97□□□□□ -1.45
RFX4-201ENST00000229387 ROBO1Q9Y6N7 1651 aa5.96□□□□□ -1.45
RFX4-201ENST00000229387 MYH14Q7Z406 1995 aaKnown RBP5.96□□□□□ -1.45
RFX4-201ENST00000229387 GRID2IPA4D2P6 1211 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 SCO2O43819 266 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 RNASEH1O60930 286 aaKnown RBP5.96□□□□□ -1.46
RFX4-201ENST00000229387 RNGTTO60942 597 aaKnown RBP5.96□□□□□ -1.46
RFX4-201ENST00000229387 ENTPD5O75356 428 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 ARHGEF15O94989 841 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 PSMG1O95456 288 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 EGFRP00533 1210 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 SERPINB2P05120 415 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 PRKAR2AP13861 404 aaKnown RBP5.96□□□□□ -1.46
RFX4-201ENST00000229387 PTPREP23469 700 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 IST1P53990 364 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 P2RX3P56373 397 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 HERVK_113P62684 666 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 AP2B1P63010 937 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 CREB5Q02930 508 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 SF3B4Q15427 424 aaKnown RBP eCLIP5.96□□□□□ -1.46
RFX4-201ENST00000229387 SLC35G1Q2M3R5 365 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 LETM2Q2VYF4 491 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 VWA3BQ502W6 1294 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 RILPL1Q5EBL4 403 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 TTC38Q5R3I4 469 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 PPP4R4Q6NUP7 873 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 ELMSAN1Q6PJG2 1045 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 PEX26Q7Z412 305 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 KBTBD2Q8IY47 623 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 FBXL16Q8N461 479 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 CASKIN2Q8WXE0 1202 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 WASF1Q92558 559 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 BORCS5Q969J3 196 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 INTS12Q96CB8 462 aaKnown RBP5.96□□□□□ -1.46
RFX4-201ENST00000229387 C12orf49Q9H741 205 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 C10orf88Q9H8K7 445 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 POLLQ9UGP5 575 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 RABGEF1Q9UJ41 708 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 ANGPTL2Q9UKU9 493 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 GDAQ9Y2T3 454 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 HYOU1Q9Y4L1 999 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 AK5Q9Y6K8 562 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 NUP188Q5SRE5 1749 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.96□□□□□ -1.46
RFX4-201ENST00000229387 TRIM49BA6NDI0 452 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 ZSCAN5BA6NJL1 495 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 A8MXQ7 604 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 MCF2LO15068 1137 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 PPP6R2O75170 966 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 HEXIM1O94992 359 aaKnown RBP5.96□□□□□ -1.46
RFX4-201ENST00000229387 OR6B1O95007 311 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 COL6A1P12109 1028 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 P4HA1P13674 534 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 EVI2BP34910 448 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 GNL1P36915 607 aaPredicted RBP5.96□□□□□ -1.46
RFX4-201ENST00000229387 FXR1P51114 621 aaKnown RBP eCLIP5.96□□□□□ -1.46
RFX4-201ENST00000229387 COG7P83436 770 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 FUT2Q10981 343 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 IL17AQ16552 155 aa5.96□□□□□ -1.46
RFX4-201ENST00000229387 CERKLQ49MI3 558 aaPredicted RBP5.96□□□□□ -1.46
RFX4-201ENST00000229387 CCDC58Q4VC31 144 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms