RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 CarfQ8VHI4 689 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Lpgat1Q91YX5 370 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 PirQ9D711 290 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Klrc2Q9WTJ9 238 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 1700031M16RikA0A087WSH0 82 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Gm5936A2BG95 728 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Gm5640A3KG49 728 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Abcb5B5X0E4 1255 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Gm3415J3QMS8 315 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Gm10721J3QPJ9 223 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Zfy1P10925 782 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Gnl1P36916 607 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 PuraP42669 321 aaKnown RBP14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Psmc4P54775 418 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Hoxb13P70321 286 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Cyp2j11Q3UNV2 504 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Six1Q62231 284 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Q6DFW0 481 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Retreg2Q6NS82 541 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Cpa1Q7TPZ8 419 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Zswim5Q80TC6 1188 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Snx17Q8BVL3 470 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 PreplQ8C167 725 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Uba3Q8C878 462 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Lonp1Q8CGK3 949 aaKnown RBP14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Mtmr14Q8VEL2 648 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Gm3404Q9D506 307 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Ddx24Q9ESV0 857 aaKnown RBP14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Morc1Q9WVL5 950 aa14.1□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Plekha5E9Q6H8 1269 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Casq2O09161 415 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 GmncQ3URY2 333 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Sec23ipQ6NZC7 998 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Fbxo38Q8BMI0 1194 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Kctd15Q8K0E1 283 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 ErmapQ9JLN5 566 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Noc2lQ9WV70 747 aaKnown RBP14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Gm20503G3UZK1 150 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Asprv1Q09PK2 339 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Krt77Q6IFZ6 572 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Camta2Q80Y50 1208 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Tarsl2Q8BLY2 790 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Pih1h3bQ8C6P5 218 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Mageb3Q9D2H4 330 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Dnajc12Q9R022 198 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Wnt8bQ9WUD6 350 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Ralgapa2A3KGS3 1872 aa14.09□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Ms4a14A0A087WSD2 1232 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Nrg3O35181 713 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Itgb3O54890 787 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Birc5O70201 140 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 PrphP15331 475 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Kcna3P16390 528 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Ptpn11P35235 597 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Sox8Q04886 464 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Aars2Q14CH7 980 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Ccdc85aQ5SP85 500 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Dnajc8Q6NZB0 253 aaKnown RBP14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 GmipQ6PGG2 971 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Mrgprb8Q7TN51 330 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Klhl29Q80T74 875 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 SnphQ80U23 495 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 AgpsQ8C0I1 645 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Inpp5fQ8CDA1 1132 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Fgfr1op2Q9CRA9 253 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Thumpd2Q9CZB3 528 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Lrrc71Q9D3W5 558 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Cacng4Q9JJV4 327 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Cyth1Q9QX11 398 aa14.08□□□□□ -0.15
Rnf4-204ENSMUST00000182047 Lama3Q61789 3330 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup10A2BIN1 180 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 ZxdbA2CE44 873 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup14A2CEK7 180 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup19A9C497 187 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup15A9R9W0 180 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Apol7bB1AQP7 369 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup17B5X0G2 180 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup8E9PVW0 235 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup7E9QA79 235 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup6P02762 180 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup1P11588 180 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Mup2P11589 180 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 GzmgP13366 248 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Casp4P70343 373 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Adcy8P97490 1249 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Apol7eQ3UZ24 369 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Gucy2fQ5SDA5 1108 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Nlrp4fQ66X05 959 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Ntrk3Q6VNS1 825 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Sbf1Q6ZPE2 1867 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Kdm1bQ8CIG3 826 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Tbc1d13Q8R3D1 400 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Chst12Q99LL3 419 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Golga1Q9CW79 758 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 DpysQ9EQF5 519 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Rdh14Q9ERI6 334 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 CtsfQ9R013 462 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Pdcd7Q9WTY1 482 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Slc4a11A2AJN7 862 aa14.08□□□□□ -0.16
Rnf4-204ENSMUST00000182047 Ptchd4B9EKX1 904 aa14.08□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 41.9 ms