RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Mcm9Q2KHI9 1134 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 McuQ3UMR5 350 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Ssxb5Q6XAS2 159 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Tbc1d10cQ8C9V1 444 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 PygbQ8CI94 843 aaKnown RBP12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Tlcd1Q99JT6 247 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Ndufaf7Q9CWG8 436 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Tlr9Q9EQU3 1032 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Gm43518A0A0G2JGB6 165 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Atp8b4A2ANX3 1194 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Oip5A2AQ14 241 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 PbsnO08976 174 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 4933427I04RikQ3V053 235 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Papd7Q6PB75 542 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Tmc4Q7TQ65 694 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Zhx2Q8C0C0 836 aaKnown RBP12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Prr33Q8C494 260 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 NcaldQ91X97 193 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Traf7Q922B6 594 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Gmeb1Q9JL60 562 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Rhox3cA2AWM0 215 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Vmn2r5K7N788 911 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Rhox3hL7MU37 215 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Gm3264L7N2C5 238 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 IgfalsP70389 603 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 NfibP97863 570 aaKnown RBP12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Slc24a2Q14BI1 711 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Rhox3aQ4TU90 215 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Ttc39bQ8BYY4 617 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 4932414N04RikQ8CEQ9 752 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Cox18Q8VC74 331 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Ascc2Q91WR3 749 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Psma4Q9R1P0 261 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Ap4s1Q9WVL1 144 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Bmp15Q9Z0L4 392 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Adgrb3Q80ZF8 1522 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Zfand4D3Z3C6 739 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Cyp2c68K7N6C2 491 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Psmc3O88685 442 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Tbx1P70323 479 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Thoc5Q8BKT7 683 aaKnown RBP12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Ttc16Q8C1F5 767 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Vps11Q91W86 941 aaKnown RBP12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Dcaf6Q9DC22 876 aa12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Top3bQ9Z321 862 aaKnown RBP12.9□□□□□ -0.34
Ssh1-202ENSMUST00000112298 Gjb4Q02738 266 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Adad1Q5SUE7 619 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Foxn1Q61575 648 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Capn11Q6J756 714 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Casc4Q6P2L7 435 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Them6Q80ZW2 207 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Chmp1b1Q99LU0 199 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 CygbQ9CX80 190 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Tomm70Q9CZW5 611 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Tm9sf1Q9DBU0 606 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Krt6bQ9Z331 562 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Akt1P31750 480 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Man1a1P45700 655 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Prdm8Q8BZ97 687 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Stau2Q8CJ67 570 aaKnown RBP12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Dync1li1Q8R1Q8 523 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Pcdhgc5Q91XW9 944 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Med24Q99K74 987 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 FignQ9ERZ6 759 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Scube2Q9JJS0 997 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Trpc7Q9WVC5 862 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Foxm1O08696 760 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 GclmO09172 274 aaKnown RBP12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Men1O88559 611 aaKnown RBP12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Gp1bbP56400 206 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Clec4fP70194 548 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 ItgadQ3V0T4 1168 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Raver2Q7TPD6 673 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Ccdc137Q8R0K4 290 aaKnown RBP12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Irak4Q8R4K2 459 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Rab14Q91V41 215 aaKnown RBP12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Aldh1a3Q9JHW9 512 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Kdm6bQ5NCY0 1641 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Setd1aE9PYH6 1716 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Tmem45a2B7ZWJ5 289 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Mmp20P57748 482 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Mindy1Q76LS9 468 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Suz12Q80U70 741 aaKnown RBP12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Unc5bQ8K1S3 945 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Mapre2Q8R001 326 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Rnaseh2aQ9CWY8 301 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Aox3G3X982 1335 aa12.89□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Zscan4-ps1A0A1C7CYV3 506 aa12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 CtcflA2APF3 636 aa12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Zscan4dA7KBS4 506 aa12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Hk2O08528 917 aaKnown RBP12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 WapP01173 134 aa12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 PolP11369 1281 aa12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Rpl36P47964 105 aaKnown RBP12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Zscan4fQ3URS2 506 aa12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Garnl3Q3V0G7 1038 aa12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Mars2Q499X9 586 aaKnown RBP12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Zfp512bQ6PHP4 879 aa12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Zscan4cQ80VJ6 506 aa12.88□□□□□ -0.35
Ssh1-202ENSMUST00000112298 Lrrc1Q80VQ1 524 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms