RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 CbarpQ66L44 698 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 OcrlQ6NVF0 900 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 MregQ6NVG5 214 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Hmgb4Q6P8W9 181 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Garem2Q6PAJ3 880 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tubgcp5Q8BKN5 1024 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Lrif1Q8CDD9 755 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Pomgnt1Q91X88 660 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 BrdtQ91Y44 956 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Wbp11Q923D5 641 aaKnown RBP12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ier5lQ99J55 406 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Hs6st3Q9QYK4 470 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Atp6v1c1Q9Z1G3 382 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Plcg1Q62077 1302 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Lrrc73B2RWC4 316 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm4841E9QAA8 417 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Pcdh9F8VPK8 1237 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Aoc3O70423 765 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Slc10a3P21129 473 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Elk3P41971 409 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Usp10P52479 792 aaKnown RBP12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 PkmP52480 531 aaKnown RBP12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Cyth2P63034 400 aaKnown RBP12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Slc24a2Q14BI1 711 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Pi4k2aQ2TBE6 479 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Spdye4aQ5IBH6 268 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Sema5bQ60519 1093 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rgl2Q61193 778 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ripor1Q68FE6 1223 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Frmd5Q6P5H6 517 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Prpf38bQ80SY5 542 aaKnown RBP12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Btbd10Q80X66 475 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Cpsf7Q8BTV2 471 aaKnown RBP12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Hectd2Q8CDU6 774 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Lonp1Q8CGK3 949 aaKnown RBP12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Pdik1lQ8QZR7 341 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Setd3Q91WC0 594 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tdrd1Q99MV1 1172 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Emc2Q9CRD2 297 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 ParvaQ9EPC1 372 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ccdc22Q9JIG7 627 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Znf536Q8K083 1302 aa12.11□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm29133A0A1B0GT72 266 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ripor3A1L3T7 938 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rap1gapA2ALS5 663 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tubb1A2AQ07 451 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gm16430A6X8J1 155 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Grik3B1AS29 919 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Krt90E9Q1Z0 538 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ppargc1aO70343 797 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rtn2O70622 471 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Shoc2O88520 582 aaKnown RBP12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 HdcP23738 662 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Bcat1P24288 386 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Pms2P54279 859 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rnf216P58283 853 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 InhbaQ04998 424 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Lrrn4clQ3TYX2 239 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Znf746Q3U133 652 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Sult1d1Q3UZZ6 295 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Znf365Q8BG89 408 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Nipa1Q8BHK1 323 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Q8R1Y2 203 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Dnajc9Q91WN1 259 aaKnown RBP12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Q9CPS8 106 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Slxl1Q9D515 155 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rabgap1A2AWA9 1064 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Raph1F2Z3U3 1266 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 CidebO70303 219 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Il2rbP16297 539 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tnni3P48787 211 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Hoxc13P50207 328 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Smyd1P97443 490 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 PterQ60866 349 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tcf12Q61286 706 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Vil1Q62468 827 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 ErfeQ6PGN1 340 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 NfascQ810U3 1240 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Atad3Q925I1 591 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rpa3Q9CQ71 121 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Gins2Q9D600 185 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Dusp21Q9D9D8 189 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 DpysQ9EQF5 519 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ccr10Q9JL21 362 aa12.1□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Plekhg4A0A1L1SU27 1217 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Bmpr2O35607 1038 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Kctd8Q50H33 476 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Q6GQV0 436 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Vmn2r43Q80Z08 845 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Rps6kc1Q8BLK9 1056 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Il33Q8BVZ5 266 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Arhgap24Q8C4V1 747 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Vmn1r199Q8R280 367 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Trim60Q8VI40 466 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Tsc1Q9EP53 1161 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Atrnl1Q6A051 1378 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Fam171a2A2A699 822 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Klhl41A2AUC9 606 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Ssxb9A2BI93 185 aa12.09□□□□□ -0.47
Col9a1-202ENSMUST00000088349 Siah3B2RWG3 268 aa12.09□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms