RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Phf21aQ6ZPK0 659 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Kbtbd3Q8BHI4 607 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Znf76Q8BMU0 568 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Tmem120aQ8C1E7 343 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Apol9bQ8C7I4 310 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Rsad2Q8CBB9 362 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Angel2Q8K1C0 544 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Unc5dQ8K1S2 956 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Stxbp5Q8K400 1152 aaKnown RBP11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Apol9aQ8VDU3 310 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Ttc39cQ8VE09 580 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Pcdh18Q8VHR0 1134 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Ugp2Q91ZJ5 508 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Dis3Q9CSH3 958 aaKnown RBP11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Tmem206Q9D771 350 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Gtf2h1Q9DBA9 547 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Map3k14Q9WUL6 942 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Cog1Q9Z160 980 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Sept3Q9Z1S5 350 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Thsd7bQ6P4U0 1607 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Gm11985A0A1B0GS61 206 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Proca1B0QZF7 307 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Ccdc170D3YXL0 722 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 E9QMW4 1145 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Ap1g2O88512 791 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Rpl7aP12970 266 aaKnown RBP11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Ptgs2Q05769 604 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Upf3bQ3ULL6 472 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Vps41Q5KU39 853 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Ccdc92bQ5SUE3 299 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Ctnna2Q61301 953 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 DstykQ6XUX1 927 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Elac2Q80Y81 831 aaKnown RBP11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Stkld1Q80YS9 662 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 FtoQ8BGW1 502 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Tmem145Q8C4U2 746 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Zfpm2Q8CCH7 1151 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Lamtor4Q8CF66 99 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Actl9Q8CG27 415 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Tph2Q8CGV2 488 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Fkbp6Q91XW8 327 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Gimap4Q99JY3 219 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Tomm20Q9DCC8 145 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Mgea5Q9EQQ9 916 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Cables1Q9ESJ1 568 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Cpsf3Q9QXK7 684 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Akt3Q9WUA6 479 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Gadd45gQ9Z111 159 aa11.9□□□□□ -0.5
Ddx55-201ENSMUST00000071057 Gm12666A2AMD0 254 aaKnown RBP11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Lrrc63A6H694 637 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 TroapB7ZNG4 668 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Prdm15E9Q8T2 1174 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 CidebO70303 219 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 PtprcP06800 1291 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Hoxc6P10629 235 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Marcksl1P28667 200 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 EvlP70429 414 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 NogP97466 232 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 4930502E18RikQ14BQ3 236 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ccser2Q3UHI0 833 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Six1Q62231 284 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Fnbp1Q80TY0 616 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Creb3l2Q8BH52 521 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Psd4Q8BLR5 1005 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Snx30Q8CE50 437 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Fate1Q8CEK7 99 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Lonp1Q8CGK3 949 aaKnown RBP11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Arhgap18Q8K0Q5 663 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Dennd1aQ8K382 1016 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Coq6Q8R1S0 476 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Xpo5Q924C1 1204 aaKnown RBP11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Grk2Q99MK8 689 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Eif4e3Q9DBB5 207 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 SyncQ9EPM5 470 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 MefvQ9JJ26 767 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Rfx5Q9JL61 658 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Net1Q9Z206 595 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Fndc3c1Q6DFV6 1356 aa11.9□□□□□ -0.51
Ddx55-201ENSMUST00000071057 FscbA1EGX6 1074 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ttc17E9PVB5 1198 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Rasal2E9PW37 1286 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Gm10801F7C7Q0 168 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Gm8909G3UXE9 396 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 CflarO35732 481 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ncf2O70145 525 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Grk4O70291 574 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 IapP03975 557 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tuba1bP05213 451 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Pgk2P09041 417 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 PahP16331 453 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tgfb3P17125 410 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 EdnrbP48302 442 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Lpar1P61793 364 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tuba1aP68369 451 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Rcn1Q05186 325 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Arhgap1Q5FWK3 439 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Mtus1Q5HZI1 1210 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Tcf4Q60722 670 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Slc39a10Q6P5F6 833 aa11.89□□□□□ -0.51
Ddx55-201ENSMUST00000071057 Ntrk3Q6VNS1 825 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms