RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 HpgdQ8VCC1 269 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ap4b1Q9WV76 738 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Krt42Q6IFX2 452 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Glra3Q91XP5 464 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 DarsQ922B2 501 aaKnown RBP17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gm8011K7N6Y5 207 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 FynP39688 537 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 E2f7Q6S7F2 904 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Sgo2bJ3QMK1 1167 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Znf426Q8R1D1 550 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Casz1Q9CWL2 1761 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Pde4dipQ80YT7 2224 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Sat1P48026 171 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Smarcal1Q8BJL0 910 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 HadhaQ8BMS1 763 aaKnown RBP17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 SntnQ8C9X1 147 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ndufs3Q9DCT2 263 aaKnown RBP17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Cd19P25918 547 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Abraxas1Q8BPZ8 407 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Stau2Q8CJ67 570 aaKnown RBP17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ddx39bQ9Z1N5 428 aaKnown RBP17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Rexo5D3YW29 759 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Angpt1O08538 498 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Asna1O54984 348 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Rc3h1Q4VGL6 1130 aaKnown RBP17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Arhgap25Q8BYW1 648 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Mill1Q8HWE7 395 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Trpv3Q8K424 791 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Rprd1bQ9CSU0 326 aaKnown RBP17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Scrn1Q9CZC8 414 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Nek3Q9R0A5 511 aa17.2■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Nfx1B1AY10 1114 aaKnown RBP17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 NcstnP57716 708 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Foxn3Q499D0 457 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 TbataQ7TSD4 393 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Pglyrp2Q8VCS0 530 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Olfr67F8VPJ8 320 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Zc3h7bF8VPP8 982 aaKnown RBP17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Rrm2P11157 390 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 CtshP49935 333 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Atp13a5Q3TYU2 1216 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Camkk2Q8C078 588 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ccdc17Q8CE13 565 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 B020011L13RikA0A087WQI7 412 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gm7356A0A087WSA6 508 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Vmn2r31L7N1Z4 861 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 AlbP07724 608 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Znf608Q56A10 1511 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Chil3O35744 398 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Usp13Q5BKP2 858 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 FAM120AQ6A0A9 1112 aaKnown RBP17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tdpoz4Q6YCH2 370 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Polr2eQ80UW8 210 aaKnown RBP17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 ThegQ9JMB1 375 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 R3hdm1E9Q9Q2 1135 aaKnown RBP17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 HmbsP22907 361 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 TbcelQ8C5W3 424 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Sike1Q9CPR7 207 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Orc6Q9WUJ8 262 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gm28036V9GXJ1 658 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Epb41P48193 858 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 PrkcbP68404 671 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ppp1r13lQ5I1X5 824 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Gpr139Q80UC8 345 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 WhrnQ80VW5 918 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 EngaseQ8BX80 734 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Itga9B8JK39 1036 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tp53P02340 387 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 MyripQ8K3I4 856 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Fuca2Q99KR8 461 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ift46Q9DB07 301 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Trp53inp1Q9QXE4 239 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Add1Q9QYC0 735 aaKnown RBP17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tcp10cE9Q046 482 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 CratP47934 626 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Zbtb5Q7TQG0 670 aa17.19■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 CitP49025 2055 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tbkbp1A2A9T0 611 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Myl12aQ6ZWQ9 172 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 AgpsQ8C0I1 645 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Q8C1R3 189 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Btbd7Q8CFE5 1130 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ubxn2aQ99KJ0 258 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Nusap1Q9ERH4 427 aaKnown RBP17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tmem117Q8BH18 514 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Rd3Q8BRE0 195 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Prkaa2Q8BRK8 552 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Depdc7Q91WS7 511 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 IscuQ9D7P6 168 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Aldh1a3Q9JHW9 512 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Klra17Q9JMA4 273 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 AdssP46664 456 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Calb2Q08331 271 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Plk4Q64702 925 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Nkd1Q99MH6 471 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ndufaf1Q9CWX2 328 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Sgpp1Q9JI99 430 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Ap3m1Q9JKC8 418 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Scgb2b18A0A087WPA9 112 aa17.18■□□□□ 0.34
Ccdc88a-201ENSMUST00000040182 Tmem145Q8C4U2 746 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms