RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YOR214CQ12282 236 aa1.06□□□□□ -2.24
BRO1YPL084W YLR419WQ06698 1435 aaKnown RBP1.05□□□□□ -2.24
BRO1YPL084W YCR023CP25351 611 aa1.05□□□□□ -2.24
BRO1YPL084W FYV4P38783 130 aaPredicted RBP1.05□□□□□ -2.24
BRO1YPL084W YEL008WP40001 126 aa1.05□□□□□ -2.24
BRO1YPL084W ALB1P47019 175 aaPredicted RBP1.05□□□□□ -2.24
BRO1YPL084W UPS3Q04006 179 aa1.05□□□□□ -2.24
BRO1YPL084W YOR015WQ12169 119 aa1.05□□□□□ -2.24
BRO1YPL084W PST2Q12335 198 aaKnown RBP1.05□□□□□ -2.24
BRO1YPL084W YLR422WQ06409 1932 aa1.05□□□□□ -2.24
BRO1YPL084W YNL200CP40165 246 aaKnown RBP1.05□□□□□ -2.24
BRO1YPL084W TIM13P53299 105 aa1.05□□□□□ -2.24
BRO1YPL084W YKR005CQ02203 525 aa1.05□□□□□ -2.24
BRO1YPL084W AQY2P0CD90 149 aa1.04□□□□□ -2.24
BRO1YPL084W VPS51P36116 164 aa1.04□□□□□ -2.24
BRO1YPL084W YER121WP40076 114 aa1.04□□□□□ -2.24
BRO1YPL084W YFL065CP43539 102 aa1.04□□□□□ -2.24
BRO1YPL084W YDR034W-BQ6Q5X2 51 aa1.04□□□□□ -2.24
BRO1YPL084W CSH1P38287 376 aa1.04□□□□□ -2.24
BRO1YPL084W RRP17Q04031 235 aaPredicted RBP1.04□□□□□ -2.24
BRO1YPL084W YPR127WQ06494 345 aa1.04□□□□□ -2.24
BRO1YPL084W CMC2Q3E7A4 109 aa1.04□□□□□ -2.24
BRO1YPL084W SEC16P48415 2195 aaKnown RBP1.03□□□□□ -2.24
BRO1YPL084W VAR1P02381 398 aa1.03□□□□□ -2.24
BRO1YPL084W LYS2P07702 1392 aa1.03□□□□□ -2.24
BRO1YPL084W YCL042WP25572 119 aa1.03□□□□□ -2.24
BRO1YPL084W RME1P32338 300 aaKnown RBP1.03□□□□□ -2.24
BRO1YPL084W HSK3P69852 69 aa1.03□□□□□ -2.24
BRO1YPL084W UPS1Q05776 175 aa1.03□□□□□ -2.24
BRO1YPL084W TY3B-IQ7LHG5 1498 aaKnown RBP1.03□□□□□ -2.24
BRO1YPL084W CMD1P06787 147 aaKnown RBP1.03□□□□□ -2.25
BRO1YPL084W STF2P16965 84 aa1.03□□□□□ -2.25
BRO1YPL084W YGL235WP53071 178 aa1.03□□□□□ -2.25
BRO1YPL084W GRX5Q02784 150 aa1.03□□□□□ -2.25
BRO1YPL084W DML1Q03652 475 aa1.03□□□□□ -2.25
BRO1YPL084W ATG41Q12048 136 aa1.03□□□□□ -2.25
BRO1YPL084W PRP8P33334 2413 aaKnown RBP1.02□□□□□ -2.25
BRO1YPL084W YHR212W-AP0CX91 67 aa1.02□□□□□ -2.25
BRO1YPL084W YEL067CP39978 195 aa1.02□□□□□ -2.25
BRO1YPL084W SOK1P40317 901 aa1.02□□□□□ -2.25
BRO1YPL084W MPM1P40364 252 aa1.02□□□□□ -2.25
BRO1YPL084W NSE4P43124 402 aa1.02□□□□□ -2.25
BRO1YPL084W XPT1P47165 209 aa1.02□□□□□ -2.25
BRO1YPL084W YHP1Q04116 353 aa1.02□□□□□ -2.25
BRO1YPL084W RIM9Q04734 239 aa1.02□□□□□ -2.25
BRO1YPL084W RAD6P06104 172 aa1.01□□□□□ -2.25
BRO1YPL084W THI74Q04083 370 aa1.01□□□□□ -2.25
BRO1YPL084W YOR381W-AQ3E804 55 aa1.01□□□□□ -2.25
BRO1YPL084W SEN2P16658 377 aa1.01□□□□□ -2.25
BRO1YPL084W MET31Q03081 177 aa1.01□□□□□ -2.25
BRO1YPL084W YEL028WP39989 153 aa1□□□□□ -2.25
BRO1YPL084W COA3Q3E7B2 85 aa1□□□□□ -2.25
BRO1YPL084W MDN1Q12019 4910 aaKnown RBP1□□□□□ -2.25
BRO1YPL084W GLR1P41921 483 aaKnown RBP1□□□□□ -2.25
BRO1YPL084W TMA20P89886 181 aaPredicted RBP1□□□□□ -2.25
BRO1YPL084W ELP6Q04868 273 aa1□□□□□ -2.25
BRO1YPL084W TY4B-JP47024 1803 aa1□□□□□ -2.25
BRO1YPL084W CCS1P40202 249 aaKnown RBP0.99□□□□□ -2.25
BRO1YPL084W YGL101WP53144 215 aa0.99□□□□□ -2.25
BRO1YPL084W RDI1Q12434 202 aa0.99□□□□□ -2.25
BRO1YPL084W NUF2P33895 451 aa0.99□□□□□ -2.25
BRO1YPL084W YRA2P36036 203 aaKnown RBP RIP-Chip data0.99□□□□□ -2.25not detected
BRO1YPL084W YEL073CP39974 107 aa0.99□□□□□ -2.25
BRO1YPL084W SYM1Q06563 197 aa0.99□□□□□ -2.25
BRO1YPL084W YMR030W-AQ3E760 96 aa0.99□□□□□ -2.25
BRO1YPL084W FKS3Q04952 1785 aa0.99□□□□□ -2.25
BRO1YPL084W QCR2P07257 368 aa0.98□□□□□ -2.25
BRO1YPL084W MAK31P23059 88 aa0.98□□□□□ -2.25
BRO1YPL084W YBL010CP32788 280 aa0.98□□□□□ -2.25
BRO1YPL084W AME1P38313 324 aa0.98□□□□□ -2.25
BRO1YPL084W SBH2P52871 88 aa0.98□□□□□ -2.25
BRO1YPL084W GCN1P33892 2672 aaKnown RBP0.98□□□□□ -2.25
BRO1YPL084W ETR1P38071 380 aa0.98□□□□□ -2.25
BRO1YPL084W FES1P38260 290 aa0.98□□□□□ -2.25
BRO1YPL084W HRD1Q08109 551 aa0.98□□□□□ -2.25
BRO1YPL084W YLR053CQ12026 108 aa0.98□□□□□ -2.25
BRO1YPL084W TAR1Q8TGM6 124 aa0.97□□□□□ -2.25
BRO1YPL084W PTC1P35182 281 aa0.97□□□□□ -2.25
BRO1YPL084W MOB1P40484 314 aa0.97□□□□□ -2.25
BRO1YPL084W HHT1P61830 136 aa0.97□□□□□ -2.25
BRO1YPL084W MAK3Q03503 176 aa0.97□□□□□ -2.25
BRO1YPL084W YDR391CQ04170 232 aa0.97□□□□□ -2.25
BRO1YPL084W YLR046CQ12253 270 aa0.97□□□□□ -2.25
BRO1YPL084W FLO1P32768 1537 aa0.97□□□□□ -2.25
BRO1YPL084W TAO3P40468 2376 aa0.97□□□□□ -2.25
BRO1YPL084W RPS28BP0C0X0 67 aaKnown RBP0.96□□□□□ -2.26
BRO1YPL084W UBI4P0CG63 381 aaKnown RBP0.96□□□□□ -2.26
BRO1YPL084W LIP1Q03579 150 aa0.96□□□□□ -2.26
BRO1YPL084W RPS28AQ3E7X9 67 aaPredicted RBP0.96□□□□□ -2.26
BRO1YPL084W TY4B-HP0C2J7 1802 aa0.96□□□□□ -2.26
BRO1YPL084W DUR1,2P32528 1835 aaKnown RBP0.96□□□□□ -2.26
BRO1YPL084W HUA1P40325 198 aa0.96□□□□□ -2.26
BRO1YPL084W PAC10P48363 199 aa0.96□□□□□ -2.26
BRO1YPL084W ORM1P53224 222 aa0.96□□□□□ -2.26
BRO1YPL084W YDR476CQ03362 224 aa0.96□□□□□ -2.26
BRO1YPL084W YPR202WQ08993 238 aa0.96□□□□□ -2.26
BRO1YPL084W YBR056W-AI2HB52 66 aa0.95□□□□□ -2.26
BRO1YPL084W RPL43AP0CX25 92 aaKnown RBP0.95□□□□□ -2.26
BRO1YPL084W RPL43BP0CX26 92 aa0.95□□□□□ -2.26
BRO1YPL084W YBR242WP38331 238 aa0.95□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms