RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	ADH3	P07246	375 aa	Known RBP	4.26	□□□□□ -1.73
NUP1	YOR098C	STP22	P25604	385 aa		4.26	□□□□□ -1.73
NUP1	YOR098C	GGC1	P38988	300 aa		4.26	□□□□□ -1.73
NUP1	YOR098C	SDH7	Q04401	133 aa		4.26	□□□□□ -1.73
NUP1	YOR098C	YDL180W	Q12301	547 aa		4.26	□□□□□ -1.73
NUP1	YOR098C	PAU2	P32612	120 aa		4.26	□□□□□ -1.73
NUP1	YOR098C	RPS20	P38701	121 aa	Known RBP	4.26	□□□□□ -1.73
NUP1	YOR098C	MED6	P38782	295 aa		4.26	□□□□□ -1.73
NUP1	YOR098C	CAB4	P53332	305 aa		4.26	□□□□□ -1.73
NUP1	YOR098C	YLR281C	Q05863	155 aa		4.26	□□□□□ -1.73
NUP1	YOR098C	YOR304C-A	O14468	76 aa		4.25	□□□□□ -1.73
NUP1	YOR098C	YPR170W-B	P0C5R9	85 aa		4.25	□□□□□ -1.73
NUP1	YOR098C	SEC59	P20048	519 aa		4.25	□□□□□ -1.73
NUP1	YOR098C	PAN3	P36102	679 aa	Predicted RBP	4.25	□□□□□ -1.73
NUP1	YOR098C	FLX1	P40464	311 aa		4.25	□□□□□ -1.73
NUP1	YOR098C	ERJ5	P43613	295 aa	Predicted RBP	4.25	□□□□□ -1.73
NUP1	YOR098C	COF1	Q03048	143 aa	Known RBP	4.25	□□□□□ -1.73
NUP1	YOR098C	CUE4	Q04201	117 aa	Predicted RBP	4.25	□□□□□ -1.73
NUP1	YOR098C	ADH1	P00330	348 aa	Known RBP	4.25	□□□□□ -1.73
NUP1	YOR098C	HAP2	P06774	265 aa		4.25	□□□□□ -1.73
NUP1	YOR098C	GSP1	P32835	219 aa	Known RBP	4.25	□□□□□ -1.73
NUP1	YOR098C	GSP2	P32836	220 aa	Known RBP	4.25	□□□□□ -1.73
NUP1	YOR098C	RPF1	P38805	295 aa	Known RBP	4.25	□□□□□ -1.73
NUP1	YOR098C	PAC10	P48363	199 aa		4.25	□□□□□ -1.73
NUP1	YOR098C	CYT2	Q00873	224 aa		4.25	□□□□□ -1.73
NUP1	YOR098C	TRS20	P38334	175 aa		4.25	□□□□□ -1.73
NUP1	YOR098C	OM14	P38325	134 aa		4.24	□□□□□ -1.73
NUP1	YOR098C	YPL073C	P40323	161 aa		4.24	□□□□□ -1.73
NUP1	YOR098C	PGU1	P47180	361 aa		4.24	□□□□□ -1.73
NUP1	YOR098C	FIT1	Q04433	528 aa		4.24	□□□□□ -1.73
NUP1	YOR098C	PRP11	Q07350	266 aa	Predicted RBP	4.24	□□□□□ -1.73
NUP1	YOR098C	YOL162W	P0CF19	215 aa		4.24	□□□□□ -1.73
NUP1	YOR098C	SYS1	P41544	203 aa		4.24	□□□□□ -1.73
NUP1	YOR098C	BAT2	P47176	376 aa	Known RBP	4.24	□□□□□ -1.73
NUP1	YOR098C	YGL088W	P53151	121 aa		4.24	□□□□□ -1.73
NUP1	YOR098C	BOR1	P53838	576 aa		4.24	□□□□□ -1.73
NUP1	YOR098C	PBA1	Q05778	276 aa		4.24	□□□□□ -1.73
NUP1	YOR098C	RPL9A	P05738	191 aa	Known RBP	4.23	□□□□□ -1.73
NUP1	YOR098C	SKI6	P46948	246 aa	Predicted RBP	4.23	□□□□□ -1.73
NUP1	YOR098C	OST2	P46964	130 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	RPL9B	P51401	191 aa	Known RBP	4.23	□□□□□ -1.73
NUP1	YOR098C	YGR219W	P53307	113 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	YPL264C	Q08980	353 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	FCF2	Q12035	217 aa	Predicted RBP	4.23	□□□□□ -1.73
NUP1	YOR098C	YNR034W-A	Q3E841	98 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	MRPL15	P36523	253 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	YFR054C	P43622	192 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	UFD1	P53044	361 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	YOL029C	Q08187	201 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	YOR385W	Q08909	290 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	GEP5	Q12393	293 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	MRS4	P23500	304 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	DLS1	P40366	167 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	TTI2	P47168	421 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	YOR020W-A	Q3E824	90 aa		4.23	□□□□□ -1.73
NUP1	YOR098C	MRPL11	P36521	249 aa	Predicted RBP	4.22	□□□□□ -1.73
NUP1	YOR098C	YGL118C	P53132	145 aa		4.22	□□□□□ -1.73
NUP1	YOR098C	IRC25	Q07951	179 aa		4.22	□□□□□ -1.73
NUP1	YOR098C	DFM1	Q12743	341 aa	Known RBP	4.22	□□□□□ -1.73
NUP1	YOR098C	YLR146W-A	Q2V2P1	62 aa		4.22	□□□□□ -1.73
NUP1	YOR098C	COX19	Q3E731	98 aa		4.22	□□□□□ -1.73
NUP1	YOR098C	YIR021W-A	Q3E739	70 aa		4.22	□□□□□ -1.73
NUP1	YOR098C	MRP49	P32388	137 aa		4.22	□□□□□ -1.73
NUP1	YOR098C	APJ1	P53940	528 aa		4.22	□□□□□ -1.73
NUP1	YOR098C	ECM19	Q06011	112 aa		4.22	□□□□□ -1.73
NUP1	YOR098C	ODC2	Q99297	307 aa		4.22	□□□□□ -1.73
NUP1	YOR098C	YHL026C	P38740	315 aa		4.21	□□□□□ -1.73
NUP1	YOR098C	PAU15	P40585	124 aa		4.21	□□□□□ -1.73
NUP1	YOR098C	FIP1	P45976	327 aa		4.21	□□□□□ -1.73
NUP1	YOR098C	MIG3	P39943	394 aa		4.21	□□□□□ -1.74
NUP1	YOR098C	CNL1	Q06333	122 aa		4.21	□□□□□ -1.74
NUP1	YOR098C	YPR117W	Q06116	2489 aa		4.21	□□□□□ -1.74
NUP1	YOR098C	RPS25B	P0C0T4	108 aa	Known RBP	4.21	□□□□□ -1.74
NUP1	YOR098C	YPT53	P36019	220 aa		4.21	□□□□□ -1.74
NUP1	YOR098C	MRPL24	P36525	258 aa	Predicted RBP	4.21	□□□□□ -1.74
NUP1	YOR098C	YOR015W	Q12169	119 aa		4.21	□□□□□ -1.74
NUP1	YOR098C	RPS25A	Q3E792	108 aa	Predicted RBP	4.21	□□□□□ -1.74
NUP1	YOR098C	COA6	Q3E846	104 aa		4.21	□□□□□ -1.74
NUP1	YOR098C	YPT31	P38555	223 aa	Known RBP	4.2	□□□□□ -1.74
NUP1	YOR098C	TEM1	P38987	245 aa		4.2	□□□□□ -1.74
NUP1	YOR098C	AVO2	Q04749	426 aa		4.2	□□□□□ -1.74
NUP1	YOR098C	RPB9	P27999	122 aa		4.2	□□□□□ -1.74
NUP1	YOR098C	ECM34	P38728	170 aa		4.2	□□□□□ -1.74
NUP1	YOR098C	ALG9	P53868	555 aa	Known RBP	4.2	□□□□□ -1.74
NUP1	YOR098C	CWC27	Q02770	301 aa		4.2	□□□□□ -1.74
NUP1	YOR098C	CSI2	Q08054	341 aa		4.2	□□□□□ -1.74
NUP1	YOR098C	MCP1	Q12106	302 aa		4.2	□□□□□ -1.74
NUP1	YOR098C	YLR118C	Q12354	227 aa		4.2	□□□□□ -1.74
NUP1	YOR098C	SGA1	P08019	549 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	ATP5	P09457	212 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	IGD1	P43598	195 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	TDA4	P47153	279 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	YPL067C	Q02754	198 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	FYV7	Q12247	151 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	YLR156W	P0CE96	114 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	YLR159W	P0CE97	114 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	YLR161W	P0CE98	114 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	MIG1	P27705	504 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	PIR1	Q03178	341 aa		4.19	□□□□□ -1.74
NUP1	YOR098C	RSM10	Q03201	203 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 104.3 ms