RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W YOR072WQ08486 104 aa1.07□□□□□ -2.24
SWM2YNR004W FCY1Q12178 158 aa1.07□□□□□ -2.24
SWM2YNR004W FAS1P07149 2051 aaKnown RBP1.07□□□□□ -2.24
SWM2YNR004W SRP21P32342 167 aa1.06□□□□□ -2.24
SWM2YNR004W YBR027CP38220 110 aa1.06□□□□□ -2.24
SWM2YNR004W YEL014CP39999 101 aa1.06□□□□□ -2.24
SWM2YNR004W YGL193CP53097 103 aa1.06□□□□□ -2.24
SWM2YNR004W ORM1P53224 222 aa1.06□□□□□ -2.24
SWM2YNR004W RCF2P53721 224 aa1.06□□□□□ -2.24
SWM2YNR004W SCS22Q6Q595 175 aa1.06□□□□□ -2.24
SWM2YNR004W ACC1Q00955 2233 aaKnown RBP1.05□□□□□ -2.24
SWM2YNR004W EFM5P53200 248 aaKnown RBP1.05□□□□□ -2.24
SWM2YNR004W IRC21Q04772 201 aa1.05□□□□□ -2.24
SWM2YNR004W IRC19Q07843 230 aa1.05□□□□□ -2.24
SWM2YNR004W ARC19P33204 171 aaKnown RBP1.04□□□□□ -2.24
SWM2YNR004W FIP1P45976 327 aa1.04□□□□□ -2.24
SWM2YNR004W MHF1Q3E835 90 aa1.04□□□□□ -2.24
SWM2YNR004W HSP12P22943 109 aaKnown RBP1.03□□□□□ -2.24
SWM2YNR004W YCR001WP25347 104 aa1.03□□□□□ -2.24
SWM2YNR004W SRL3P36167 246 aa1.03□□□□□ -2.24
SWM2YNR004W YDR366CP87287 132 aa1.03□□□□□ -2.24
SWM2YNR004W GPI11Q06636 219 aa1.03□□□□□ -2.24
SWM2YNR004W YDL241WQ07738 123 aa1.03□□□□□ -2.24
SWM2YNR004W RFU1Q08003 200 aa1.03□□□□□ -2.24
SWM2YNR004W TAF2P23255 1407 aa1.02□□□□□ -2.25
SWM2YNR004W MRS4P23500 304 aa1.02□□□□□ -2.25
SWM2YNR004W MRPL24P36525 258 aaPredicted RBP1.02□□□□□ -2.25
SWM2YNR004W ATG8P38182 117 aaRIP-Chip data1.02□□□□□ -2.25not detected
SWM2YNR004W LSM8P47093 109 aaKnown RBP1.02□□□□□ -2.25
SWM2YNR004W YPR202WQ08993 238 aa1.02□□□□□ -2.25
SWM2YNR004W KTI11Q3E840 82 aa1.02□□□□□ -2.25
SWM2YNR004W RIB3Q99258 208 aa1.02□□□□□ -2.25
SWM2YNR004W QCR6P00127 147 aa1.01□□□□□ -2.25
SWM2YNR004W NHP6AP11632 93 aaKnown RBP1.01□□□□□ -2.25
SWM2YNR004W FUN14P18411 198 aa1.01□□□□□ -2.25
SWM2YNR004W PHO13P19881 312 aa1.01□□□□□ -2.25
SWM2YNR004W SPG1P50088 95 aa1.01□□□□□ -2.25
SWM2YNR004W AVO2Q04749 426 aa1.01□□□□□ -2.25
SWM2YNR004W HUT1Q12520 339 aa1.01□□□□□ -2.25
SWM2YNR004W YHR213W-BQ8TGK1 99 aa1.01□□□□□ -2.25
SWM2YNR004W HAP2P06774 265 aa1□□□□□ -2.25
SWM2YNR004W RPS22AP0C0W1 130 aaKnown RBP1□□□□□ -2.25
SWM2YNR004W DDR48P18899 430 aaKnown RBP1□□□□□ -2.25
SWM2YNR004W SLM6P38343 150 aa1□□□□□ -2.25
SWM2YNR004W EST3Q03096 181 aa1□□□□□ -2.25
SWM2YNR004W YPR153WQ06537 140 aa1□□□□□ -2.25
SWM2YNR004W NAT5Q08689 176 aa1□□□□□ -2.25
SWM2YNR004W RPS22BQ3E7Y3 130 aaKnown RBP1□□□□□ -2.25
SWM2YNR004W SPA2P23201 1466 aaKnown RBP0.99□□□□□ -2.25
SWM2YNR004W PET54P10834 293 aa0.99□□□□□ -2.25
SWM2YNR004W RBL2P48606 106 aaKnown RBP0.99□□□□□ -2.25
SWM2YNR004W DIE2P50076 525 aa0.99□□□□□ -2.25
SWM2YNR004W YGR039WP53225 103 aa0.99□□□□□ -2.25
SWM2YNR004W RAF1Q06891 181 aa0.99□□□□□ -2.25
SWM2YNR004W PRM3Q08931 133 aa0.99□□□□□ -2.25
SWM2YNR004W PET20Q99373 253 aa0.99□□□□□ -2.25
SWM2YNR004W RPL33AP05744 107 aaKnown RBP0.98□□□□□ -2.25
SWM2YNR004W YJL009WP47078 108 aa0.98□□□□□ -2.25
SWM2YNR004W YNL122CP53921 115 aaPredicted RBP0.98□□□□□ -2.25
SWM2YNR004W YCL001W-AP87012 153 aa0.98□□□□□ -2.25
SWM2YNR004W MED11Q99278 115 aa0.98□□□□□ -2.25
SWM2YNR004W HSP150P32478 413 aa0.97□□□□□ -2.25
SWM2YNR004W IPI1P38803 334 aaPredicted RBP0.97□□□□□ -2.25
SWM2YNR004W IPT1P38954 527 aa0.97□□□□□ -2.25
SWM2YNR004W SED1Q01589 338 aa0.97□□□□□ -2.25
SWM2YNR004W COA6Q3E846 104 aa0.97□□□□□ -2.25
SWM2YNR004W YOL013W-AP0C272 63 aaPredicted RBP0.96□□□□□ -2.26
SWM2YNR004W MRPL44P19956 98 aa0.96□□□□□ -2.26
SWM2YNR004W YNL019CP53975 284 aa0.96□□□□□ -2.26
SWM2YNR004W COF1Q03048 143 aaKnown RBP0.96□□□□□ -2.26
SWM2YNR004W SEN15Q04675 128 aa0.96□□□□□ -2.26
SWM2YNR004W CMC4Q3E7A9 73 aa0.96□□□□□ -2.26
SWM2YNR004W ANB1P19211 157 aa0.95□□□□□ -2.26
SWM2YNR004W YAP3P38749 330 aa0.95□□□□□ -2.26
SWM2YNR004W YHR140WP38842 239 aa0.95□□□□□ -2.26
SWM2YNR004W HHY1P39982 102 aa0.95□□□□□ -2.26
SWM2YNR004W MPC1P53157 130 aaKnown RBP0.95□□□□□ -2.26
SWM2YNR004W HHO1P53551 258 aa0.95□□□□□ -2.26
SWM2YNR004W MGR2Q02889 113 aa0.95□□□□□ -2.26
SWM2YNR004W ATP14Q12349 124 aa0.95□□□□□ -2.26
SWM2YNR004W PFY1P07274 126 aa0.94□□□□□ -2.26
SWM2YNR004W HAP3P13434 144 aa0.94□□□□□ -2.26
SWM2YNR004W YJL218WP40892 196 aaKnown RBP0.94□□□□□ -2.26
SWM2YNR004W YGR201CP42936 225 aa0.94□□□□□ -2.26
SWM2YNR004W LSM1P47017 172 aaKnown RBP0.94□□□□□ -2.26
SWM2YNR004W YLR422WQ06409 1932 aa0.93□□□□□ -2.26
SWM2YNR004W RPS1BP23248 255 aaKnown RBP0.93□□□□□ -2.26
SWM2YNR004W SUI1P32911 108 aaKnown RBP0.93□□□□□ -2.26
SWM2YNR004W PHB1P40961 287 aa0.93□□□□□ -2.26
SWM2YNR004W SMD2Q06217 110 aaKnown RBP0.93□□□□□ -2.26
SWM2YNR004W ROM2P51862 1356 aaKnown RBP0.93□□□□□ -2.26
SWM2YNR004W YGL014C-AP0C5N1 53 aa0.92□□□□□ -2.26
SWM2YNR004W YGR017WP53210 297 aa0.92□□□□□ -2.26
SWM2YNR004W YMR122CQ03879 124 aa0.92□□□□□ -2.26
SWM2YNR004W CSN9Q03981 162 aa0.92□□□□□ -2.26
SWM2YNR004W LDB18Q07887 179 aa0.92□□□□□ -2.26
SWM2YNR004W SLH1P53327 1967 aaKnown RBP0.92□□□□□ -2.26
SWM2YNR004W FYV5P25585 152 aa0.91□□□□□ -2.26
SWM2YNR004W RME1P32338 300 aaKnown RBP0.91□□□□□ -2.26
SWM2YNR004W RPS1AP33442 255 aaKnown RBP0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms