RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	SPS18	P32572	300 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	NTF2	P33331	125 aa	Known RBP	2.77	□□□□□ -1.97
TPM1	YNL079C	SDH4	P37298	181 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	MRPS9	P38120	278 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	TRS20	P38334	175 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	YGP1	P38616	354 aa	Known RBP	2.77	□□□□□ -1.97
TPM1	YNL079C	PAU13	P38725	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	ECM14	P38836	430 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	NSA2	P40078	261 aa	Known RBP	2.77	□□□□□ -1.97
TPM1	YNL079C	PAU15	P40585	124 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	NSE4	P43124	402 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	YJL118W	P47022	219 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	DAN1	P47178	298 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	RIB4	P50861	169 aa	Predicted RBP	2.77	□□□□□ -1.97
TPM1	YNL079C	YGR026W	P53217	278 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	LST7	P53237	242 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	YNL046W	P53956	172 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	DYN2	Q02647	92 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	PAU10	Q03050	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	AVO2	Q04749	426 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	PAU20	Q08322	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	YOR029W	Q12243	111 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	YLR118C	Q12354	227 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	SNU23	Q12368	194 aa	Predicted RBP	2.77	□□□□□ -1.97
TPM1	YNL079C	YGL258W-A	Q3E740	77 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	PAU9	Q3E770	120 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	RPS25A	Q3E792	108 aa	Predicted RBP	2.77	□□□□□ -1.97
TPM1	YNL079C	YOS1	Q3E834	85 aa		2.77	□□□□□ -1.97
TPM1	YNL079C	YBR056W-A	I2HB52	66 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	RPB3	P16370	318 aa	Known RBP	2.76	□□□□□ -1.97
TPM1	YNL079C	CDC39	P25655	2108 aa	Known RBP	2.76	□□□□□ -1.97
TPM1	YNL079C	ACP1	P32463	125 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	ALK2	P32789	676 aa	Predicted RBP	2.76	□□□□□ -1.97
TPM1	YNL079C	CTR2	P38865	189 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	YER121W	P40076	114 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	MGA1	P53050	456 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	FYV6	P53913	173 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	YMR007W	Q03675	126 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	FRQ1	Q06389	190 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	CTR3	Q06686	241 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	POC4	Q12245	148 aa	Predicted RBP	2.76	□□□□□ -1.97
TPM1	YNL079C	RAX2	Q12465	1220 aa		2.76	□□□□□ -1.97
TPM1	YNL079C	CDC7	P06243	507 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	APA2	P22108	325 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	POF1	P25576	258 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	MID2	P36027	376 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	DER1	P38307	211 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	YPT31	P38555	223 aa	Known RBP	2.75	□□□□□ -1.97
TPM1	YNL079C	LOC1	P43586	204 aa	Predicted RBP	2.75	□□□□□ -1.97
TPM1	YNL079C	YJR015W	P47090	510 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	MIC27	P50945	234 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	YGR018C	P53211	109 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	SSU72	P53538	206 aa	Predicted RBP	2.75	□□□□□ -1.97
TPM1	YNL079C	SHH3	Q04487	196 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	DXO1	Q06349	442 aa		2.75	□□□□□ -1.97
TPM1	YNL079C	ADH1	P00330	348 aa	Known RBP	2.74	□□□□□ -1.97
TPM1	YNL079C	HTB1	P02293	131 aa	Known RBP	2.74	□□□□□ -1.97
TPM1	YNL079C	RPS22A	P0C0W1	130 aa	Known RBP	2.74	□□□□□ -1.97
TPM1	YNL079C	SPS100	P13130	326 aa		2.74	□□□□□ -1.97
TPM1	YNL079C	TOM40	P23644	387 aa	Known RBP	2.74	□□□□□ -1.97
TPM1	YNL079C	FPR2	P32472	135 aa		2.74	□□□□□ -1.97
TPM1	YNL079C	TCA17	P32613	152 aa		2.74	□□□□□ -1.97
TPM1	YNL079C	YBR013C	P38215	129 aa		2.74	□□□□□ -1.97
TPM1	YNL079C	HSP10	P38910	106 aa		2.74	□□□□□ -1.97
TPM1	YNL079C	YNR064C	P53750	290 aa		2.74	□□□□□ -1.97
TPM1	YNL079C	ATC1	Q04005	294 aa		2.74	□□□□□ -1.97
TPM1	YNL079C	YHP1	Q04116	353 aa		2.74	□□□□□ -1.97
TPM1	YNL079C	RAD28	Q12021	506 aa		2.74	□□□□□ -1.97
TPM1	YNL079C	YMR316C-A	I2HB70	103 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	PAU19	P0CE85	124 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	PAU21	P0CE86	164 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	PAU22	P0CE87	164 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	NHP6A	P11632	93 aa	Known RBP	2.73	□□□□□ -1.97
TPM1	YNL079C	PAU3	P25610	124 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	YKL187C	P34231	750 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	YAR068W	P39564	161 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	CYB5	P40312	120 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	GPI2	P46961	280 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	DSK2	P48510	373 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	SBH2	P52871	88 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	YGL114W	P53134	725 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	DAD3	P69850	94 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	MIX17	Q03667	156 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	YDR115W	Q04598	105 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	LOA1	Q06508	300 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	ARR2	Q06597	130 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	YCL048W-A	Q2V2Q2	79 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	CMC2	Q3E7A4	109 aa		2.73	□□□□□ -1.97
TPM1	YNL079C	FMP49	A0A023PZB3	126 aa		2.72	□□□□□ -1.97
TPM1	YNL079C	BGL2	P15703	313 aa	Known RBP	2.72	□□□□□ -1.97
TPM1	YNL079C	RNA15	P25299	296 aa	Predicted RBP	2.72	□□□□□ -1.97
TPM1	YNL079C	RAD23	P32628	398 aa	Known RBP	2.72	□□□□□ -1.97
TPM1	YNL079C	TOR1	P35169	2470 aa		2.72	□□□□□ -1.97
TPM1	YNL079C	SUR2	P38992	349 aa		2.72	□□□□□ -1.97
TPM1	YNL079C	BDH1	P39714	382 aa		2.72	□□□□□ -1.97
TPM1	YNL079C	PEX22	P39718	180 aa		2.72	□□□□□ -1.97
TPM1	YNL079C	LST8	P41318	303 aa		2.72	□□□□□ -1.97
TPM1	YNL079C	YCH1	P42937	148 aa		2.72	□□□□□ -1.97
TPM1	YNL079C	PAU5	P43575	122 aa		2.72	□□□□□ -1.97
TPM1	YNL079C	HIT1	P46973	164 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms