RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A CYC2P38909 366 aa2.29□□□□□ -2.04
YNL054W-AYNL054W-A UBR2Q07963 1872 aa2.29□□□□□ -2.04
YNL054W-AYNL054W-A GPI2P46961 280 aa2.28□□□□□ -2.04
YNL054W-AYNL054W-A FMN1Q03778 218 aa2.28□□□□□ -2.04
YNL054W-AYNL054W-A CSN9Q03981 162 aa2.28□□□□□ -2.04
YNL054W-AYNL054W-A RRT7Q07829 113 aa2.28□□□□□ -2.04
YNL054W-AYNL054W-A CMC4Q3E7A9 73 aa2.28□□□□□ -2.04
YNL054W-AYNL054W-A SPA2P23201 1466 aaKnown RBP2.28□□□□□ -2.04
YNL054W-AYNL054W-A RPC19P28000 142 aaKnown RBP2.27□□□□□ -2.05
YNL054W-AYNL054W-A RCF2P53721 224 aa2.27□□□□□ -2.05
YNL054W-AYNL054W-A NMA1Q06178 401 aaKnown RBP2.27□□□□□ -2.05
YNL054W-AYNL054W-A YGL230CP53074 147 aa2.26□□□□□ -2.05
YNL054W-AYNL054W-A YGR039WP53225 103 aa2.26□□□□□ -2.05
YNL054W-AYNL054W-A MRPL15P36523 253 aa2.25□□□□□ -2.05
YNL054W-AYNL054W-A TRS20P38334 175 aa2.25□□□□□ -2.05
YNL054W-AYNL054W-A SPC2Q04969 178 aa2.25□□□□□ -2.05
YNL054W-AYNL054W-A YPR203WQ08994 102 aa2.25□□□□□ -2.05
YNL054W-AYNL054W-A YHR212W-AP0CX91 67 aa2.24□□□□□ -2.05
YNL054W-AYNL054W-A SUI1P32911 108 aaKnown RBP2.23□□□□□ -2.05
YNL054W-AYNL054W-A PHB1P40961 287 aa2.23□□□□□ -2.05
YNL054W-AYNL054W-A YGR042WP53227 271 aa2.23□□□□□ -2.05
YNL054W-AYNL054W-A HHO1P53551 258 aa2.23□□□□□ -2.05
YNL054W-AYNL054W-A KEI1Q06346 221 aa2.23□□□□□ -2.05
YNL054W-AYNL054W-A YHR140WP38842 239 aa2.22□□□□□ -2.05
YNL054W-AYNL054W-A YGL204CP53089 101 aa2.22□□□□□ -2.05
YNL054W-AYNL054W-A ATP19P81451 68 aa2.22□□□□□ -2.05
YNL054W-AYNL054W-A YCL001W-AP87012 153 aa2.22□□□□□ -2.05
YNL054W-AYNL054W-A TAF2P23255 1407 aa2.22□□□□□ -2.05
YNL054W-AYNL054W-A VAR1P02381 398 aa2.21□□□□□ -2.06
YNL054W-AYNL054W-A HSP150P32478 413 aa2.21□□□□□ -2.06
YNL054W-AYNL054W-A YEL014CP39999 101 aa2.21□□□□□ -2.06
YNL054W-AYNL054W-A SPC3Q12133 184 aa2.21□□□□□ -2.06
YNL054W-AYNL054W-A ACC1Q00955 2233 aaKnown RBP2.21□□□□□ -2.06
YNL054W-AYNL054W-A COX5BP00425 151 aa2.2□□□□□ -2.06
YNL054W-AYNL054W-A GIM4P40005 111 aaKnown RBP2.2□□□□□ -2.06
YNL054W-AYNL054W-A YLR361C-AQ3E795 98 aa2.2□□□□□ -2.06
YNL054W-AYNL054W-A RPL14AP36105 138 aaKnown RBP2.19□□□□□ -2.06
YNL054W-AYNL054W-A POP7P38291 140 aa2.19□□□□□ -2.06
YNL054W-AYNL054W-A RPL14BP38754 138 aaKnown RBP2.19□□□□□ -2.06
YNL054W-AYNL054W-A IPT1P38954 527 aa2.19□□□□□ -2.06
YNL054W-AYNL054W-A VMA10P48836 114 aaKnown RBP2.19□□□□□ -2.06
YNL054W-AYNL054W-A FIT1Q04433 528 aa2.19□□□□□ -2.06
YNL054W-AYNL054W-A KIN28P06242 306 aa2.18□□□□□ -2.06
YNL054W-AYNL054W-A YGL041W-AP0C5N3 154 aa2.18□□□□□ -2.06
YNL054W-AYNL054W-A UBR1P19812 1950 aa2.18□□□□□ -2.06
YNL054W-AYNL054W-A YKR070WP36151 352 aaKnown RBP2.17□□□□□ -2.06
YNL054W-AYNL054W-A HPM1P40481 377 aa2.17□□□□□ -2.06
YNL054W-AYNL054W-A APS3P47064 194 aa2.17□□□□□ -2.06
YNL054W-AYNL054W-A YNL019CP53975 284 aa2.17□□□□□ -2.06
YNL054W-AYNL054W-A TIM8P57744 87 aa2.17□□□□□ -2.06
YNL054W-AYNL054W-A RPS1BP23248 255 aaKnown RBP2.17□□□□□ -2.06
YNL054W-AYNL054W-A FYV5P25585 152 aa2.17□□□□□ -2.06
YNL054W-AYNL054W-A SUA7P29055 345 aaPredicted RBP2.17□□□□□ -2.06
YNL054W-AYNL054W-A YHL037CP38733 133 aa2.17□□□□□ -2.06
YNL054W-AYNL054W-A YPR153WQ06537 140 aa2.17□□□□□ -2.06
YNL054W-AYNL054W-A HYM1P32464 399 aa2.16□□□□□ -2.06
YNL054W-AYNL054W-A PRS3P38689 320 aaKnown RBP2.16□□□□□ -2.06
YNL054W-AYNL054W-A LSM8P47093 109 aaKnown RBP2.16□□□□□ -2.06
YNL054W-AYNL054W-A DIE2P50076 525 aa2.16□□□□□ -2.06
YNL054W-AYNL054W-A SOM1Q05676 74 aa2.16□□□□□ -2.06
YNL054W-AYNL054W-A GPI11Q06636 219 aa2.16□□□□□ -2.06
YNL054W-AYNL054W-A YOR385WQ08909 290 aa2.16□□□□□ -2.06
YNL054W-AYNL054W-A ATP14Q12349 124 aa2.16□□□□□ -2.06
YNL054W-AYNL054W-A PRE1P22141 198 aaKnown RBP2.15□□□□□ -2.07
YNL054W-AYNL054W-A ATG8P38182 117 aaRIP-Chip data2.15□□□□□ -2.07not detected
YNL054W-AYNL054W-A TVP18Q04767 167 aa2.15□□□□□ -2.07
YNL054W-AYNL054W-A FMP49A0A023PZB3 126 aa2.14□□□□□ -2.07
YNL054W-AYNL054W-A YCR050CP25630 102 aa2.14□□□□□ -2.07
YNL054W-AYNL054W-A RPS1AP33442 255 aaKnown RBP2.14□□□□□ -2.07
YNL054W-AYNL054W-A YBR027CP38220 110 aa2.14□□□□□ -2.07
YNL054W-AYNL054W-A SPG1P50088 95 aa2.14□□□□□ -2.07
YNL054W-AYNL054W-A ECM31P38122 312 aa2.13□□□□□ -2.07
YNL054W-AYNL054W-A RPS20P38701 121 aaKnown RBP2.13□□□□□ -2.07
YNL054W-AYNL054W-A YFL051CP43552 160 aa2.13□□□□□ -2.07
YNL054W-AYNL054W-A EMC4P53073 190 aa2.13□□□□□ -2.07
YNL054W-AYNL054W-A DYN2Q02647 92 aa2.13□□□□□ -2.07
YNL054W-AYNL054W-A ELC1Q03071 99 aa2.13□□□□□ -2.07
YNL054W-AYNL054W-A CNL1Q06333 122 aa2.13□□□□□ -2.07
YNL054W-AYNL054W-A HUT1Q12520 339 aa2.13□□□□□ -2.07
YNL054W-AYNL054W-A NHP6AP11632 93 aaKnown RBP2.12□□□□□ -2.07
YNL054W-AYNL054W-A YAL064WP39711 94 aa2.12□□□□□ -2.07
YNL054W-AYNL054W-A YGR017WP53210 297 aa2.12□□□□□ -2.07
YNL054W-AYNL054W-A MHF1Q3E835 90 aa2.12□□□□□ -2.07
YNL054W-AYNL054W-A RIF1P29539 1916 aa2.11□□□□□ -2.07
YNL054W-AYNL054W-A DCV1P43595 202 aa2.11□□□□□ -2.07
YNL054W-AYNL054W-A YDR278CQ05612 105 aa2.11□□□□□ -2.07
YNL054W-AYNL054W-A FCY1Q12178 158 aa2.11□□□□□ -2.07
YNL054W-AYNL054W-A DDP1Q99321 188 aaKnown RBP2.11□□□□□ -2.07
YNL054W-AYNL054W-A YNL277W-AQ3E7Z0 62 aa2.1□□□□□ -2.07
YNL054W-AYNL054W-A TMA23Q03525 211 aa2.09□□□□□ -2.08
YNL054W-AYNL054W-A RAD50P12753 1312 aa2.08□□□□□ -2.08
YNL054W-AYNL054W-A HYP2P23301 157 aaKnown RBP2.08□□□□□ -2.08
YNL054W-AYNL054W-A QCR10P37299 77 aa2.08□□□□□ -2.08
YNL054W-AYNL054W-A SEN15Q04675 128 aa2.08□□□□□ -2.08
YNL054W-AYNL054W-A RAF1Q06891 181 aa2.08□□□□□ -2.08
YNL054W-AYNL054W-A VAM10Q08474 114 aa2.08□□□□□ -2.08
YNL054W-AYNL054W-A FUN14P18411 198 aa2.06□□□□□ -2.08
YNL054W-AYNL054W-A PHS1P40857 217 aa2.06□□□□□ -2.08
YNL054W-AYNL054W-A SFT1P43682 97 aa2.06□□□□□ -2.08
YNL054W-AYNL054W-A YGL149WP53116 101 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 56.4 ms