RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C ARP3P47117 449 aaKnown RBP1.17□□□□□ -2.22
SFB2YNL049C CWC23P52868 283 aaPredicted RBP1.17□□□□□ -2.22
SFB2YNL049C SLX9P53251 210 aaPredicted RBP1.17□□□□□ -2.22
SFB2YNL049C HST4P53688 370 aa1.17□□□□□ -2.22
SFB2YNL049C ALG9P53868 555 aaKnown RBP1.17□□□□□ -2.22
SFB2YNL049C YKL183C-AQ3E765 70 aa1.17□□□□□ -2.22
SFB2YNL049C NTF2P33331 125 aaKnown RBP1.17□□□□□ -2.22
SFB2YNL049C YHR138CP38841 114 aaPredicted RBP1.17□□□□□ -2.22
SFB2YNL049C FIT1Q04433 528 aa1.17□□□□□ -2.22
SFB2YNL049C YMR315WQ04869 349 aaKnown RBP1.17□□□□□ -2.22
SFB2YNL049C CCW12Q12127 133 aa1.17□□□□□ -2.22
SFB2YNL049C TIM22Q12328 207 aa1.17□□□□□ -2.22
SFB2YNL049C PST2Q12335 198 aaKnown RBP1.17□□□□□ -2.22
SFB2YNL049C YGL258W-AQ3E740 77 aa1.17□□□□□ -2.22
SFB2YNL049C MID2P36027 376 aa1.16□□□□□ -2.22
SFB2YNL049C SPI1P40092 148 aa1.16□□□□□ -2.22
SFB2YNL049C YJL028WP47062 111 aa1.16□□□□□ -2.22
SFB2YNL049C NIF3P53081 288 aa1.16□□□□□ -2.22
SFB2YNL049C PGA1P53896 198 aa1.16□□□□□ -2.22
SFB2YNL049C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
SFB2YNL049C AHC2P25649 128 aa1.16□□□□□ -2.22
SFB2YNL049C PAU2P32612 120 aa1.16□□□□□ -2.22
SFB2YNL049C MRPL38P35996 138 aaPredicted RBP1.16□□□□□ -2.22
SFB2YNL049C SUR2P38992 349 aa1.16□□□□□ -2.22
SFB2YNL049C YFR045WP43617 309 aa1.16□□□□□ -2.22
SFB2YNL049C OST3P48439 350 aa1.16□□□□□ -2.22
SFB2YNL049C ERI1P62651 68 aaKnown RBP1.16□□□□□ -2.22
SFB2YNL049C MRPS8Q03799 155 aa1.16□□□□□ -2.22
SFB2YNL049C YLR179CQ06252 201 aaKnown RBP1.16□□□□□ -2.22
SFB2YNL049C RDS3Q06835 107 aaPredicted RBP1.16□□□□□ -2.22
SFB2YNL049C IES3Q12345 250 aa1.16□□□□□ -2.22
SFB2YNL049C YPR108W-AQ3E7B3 70 aa1.16□□□□□ -2.22
SFB2YNL049C YBL008W-AQ3E821 79 aa1.16□□□□□ -2.22
SFB2YNL049C YDR157WA0A023PZE8 133 aa1.15□□□□□ -2.23
SFB2YNL049C YBR121C-AP0C5L4 52 aa1.15□□□□□ -2.23
SFB2YNL049C STE18P18852 110 aa1.15□□□□□ -2.23
SFB2YNL049C TRR1P29509 319 aaKnown RBP1.15□□□□□ -2.23
SFB2YNL049C SSH1P38353 490 aaKnown RBP1.15□□□□□ -2.23
SFB2YNL049C IRC22P40006 225 aa1.15□□□□□ -2.23
SFB2YNL049C IRC18P47056 224 aa1.15□□□□□ -2.23
SFB2YNL049C PRM8P53174 237 aa1.15□□□□□ -2.23
SFB2YNL049C MRPS17Q03246 237 aaPredicted RBP1.15□□□□□ -2.23
SFB2YNL049C YMD8Q03697 442 aa1.15□□□□□ -2.23
SFB2YNL049C HNT1Q04344 158 aaKnown RBP1.15□□□□□ -2.23
SFB2YNL049C ATO3Q12359 275 aa1.15□□□□□ -2.23
SFB2YNL049C YDL012CQ12489 107 aa1.15□□□□□ -2.23
SFB2YNL049C IDP1P21954 428 aaKnown RBP1.15□□□□□ -2.23
SFB2YNL049C AGA2P32781 87 aa1.15□□□□□ -2.23
SFB2YNL049C ECM4P36156 370 aa1.15□□□□□ -2.23
SFB2YNL049C CGR1P53188 120 aa1.15□□□□□ -2.23
SFB2YNL049C COA4Q05809 96 aa1.15□□□□□ -2.23
SFB2YNL049C HUT1Q12520 339 aa1.15□□□□□ -2.23
SFB2YNL049C SFK1P35735 353 aa1.14□□□□□ -2.23
SFB2YNL049C RRT1P38192 103 aa1.14□□□□□ -2.23
SFB2YNL049C YJR015WP47090 510 aa1.14□□□□□ -2.23
SFB2YNL049C MIC26P50087 233 aa1.14□□□□□ -2.23
SFB2YNL049C LCL1Q02786 101 aa1.14□□□□□ -2.23
SFB2YNL049C FCF1Q05498 189 aaPredicted RBP1.14□□□□□ -2.23
SFB2YNL049C TAR1Q8TGM6 124 aa1.14□□□□□ -2.23
SFB2YNL049C YHR139C-AO13536 103 aa1.14□□□□□ -2.23
SFB2YNL049C PUT1P09368 476 aa1.14□□□□□ -2.23
SFB2YNL049C RPB7P34087 171 aa1.14□□□□□ -2.23
SFB2YNL049C HTD2P38790 280 aaKnown RBP1.14□□□□□ -2.23
SFB2YNL049C RPL13BP40212 199 aaKnown RBP1.14□□□□□ -2.23
SFB2YNL049C LST8P41318 303 aa1.14□□□□□ -2.23
SFB2YNL049C MGA1P53050 456 aa1.14□□□□□ -2.23
SFB2YNL049C RMR1P53060 241 aa1.14□□□□□ -2.23
SFB2YNL049C SAY1P53324 424 aa1.14□□□□□ -2.23
SFB2YNL049C YIP3P53633 176 aa1.14□□□□□ -2.23
SFB2YNL049C SDH7Q04401 133 aa1.14□□□□□ -2.23
SFB2YNL049C FEX1Q08913 375 aa1.14□□□□□ -2.23
SFB2YNL049C FEX2Q08991 375 aa1.14□□□□□ -2.23
SFB2YNL049C RPL13AQ12690 199 aaPredicted RBP1.14□□□□□ -2.23
SFB2YNL049C ISD11Q6Q560 94 aa1.14□□□□□ -2.23
SFB2YNL049C YEL009C-AA0A023PZF2 135 aa1.13□□□□□ -2.23
SFB2YNL049C RTC6O14464 93 aa1.13□□□□□ -2.23
SFB2YNL049C RPL28P02406 149 aaKnown RBP1.13□□□□□ -2.23
SFB2YNL049C SEC22P22214 214 aa1.13□□□□□ -2.23
SFB2YNL049C AST1P35183 429 aa1.13□□□□□ -2.23
SFB2YNL049C TEM1P38987 245 aa1.13□□□□□ -2.23
SFB2YNL049C YAR068WP39564 161 aa1.13□□□□□ -2.23
SFB2YNL049C YIL059CP40520 121 aa1.13□□□□□ -2.23
SFB2YNL049C CAT5P41735 233 aa1.13□□□□□ -2.23
SFB2YNL049C HAM1P47119 197 aaKnown RBP1.13□□□□□ -2.23
SFB2YNL049C MCM22P47167 239 aa1.13□□□□□ -2.23
SFB2YNL049C SMT3Q12306 101 aaKnown RBP1.13□□□□□ -2.23
SFB2YNL049C DCN1Q12395 269 aa1.13□□□□□ -2.23
SFB2YNL049C YPR145C-AQ2V2P0 78 aa1.13□□□□□ -2.23
SFB2YNL049C HTB1P02293 131 aaKnown RBP1.13□□□□□ -2.23
SFB2YNL049C HIS3P06633 220 aa1.13□□□□□ -2.23
SFB2YNL049C URA6P15700 204 aa1.13□□□□□ -2.23
SFB2YNL049C YKR045CP36138 183 aa1.13□□□□□ -2.23
SFB2YNL049C MSA2P36157 363 aa1.13□□□□□ -2.23
SFB2YNL049C YBL071CP38185 102 aa1.13□□□□□ -2.23
SFB2YNL049C SPC24Q04477 213 aa1.13□□□□□ -2.23
SFB2YNL049C YJL197C-AP0C5P0 93 aa1.12□□□□□ -2.23
SFB2YNL049C UMP1P38293 148 aa1.12□□□□□ -2.23
SFB2YNL049C PEX17P40155 199 aa1.12□□□□□ -2.23
SFB2YNL049C YIR035CP40579 254 aa1.12□□□□□ -2.23
SFB2YNL049C GPI2P46961 280 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms