RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C YKL187CP34231 750 aa3.75□□□□□ -1.81
EAR1YMR171C PAU16P35994 123 aa3.75□□□□□ -1.81
EAR1YMR171C SAS2P40963 338 aa3.75□□□□□ -1.81
EAR1YMR171C CDC40P40968 455 aaPredicted RBP3.75□□□□□ -1.81
EAR1YMR171C RPA43P46669 326 aa3.75□□□□□ -1.81
EAR1YMR171C DYN2Q02647 92 aa3.75□□□□□ -1.81
EAR1YMR171C STD1Q02794 444 aa3.75□□□□□ -1.81
EAR1YMR171C PKR1Q03880 122 aaKnown RBP3.75□□□□□ -1.81
EAR1YMR171C TVP18Q04767 167 aa3.75□□□□□ -1.81
EAR1YMR171C RAF1Q06891 181 aa3.75□□□□□ -1.81
EAR1YMR171C YOL024WQ08172 172 aa3.75□□□□□ -1.81
EAR1YMR171C SOD1P00445 154 aaKnown RBP3.75□□□□□ -1.81
EAR1YMR171C HMRA1P0CY11 126 aa3.75□□□□□ -1.81
EAR1YMR171C HSP12P22943 109 aaKnown RBP3.75□□□□□ -1.81
EAR1YMR171C SRP21P32342 167 aa3.75□□□□□ -1.81
EAR1YMR171C RAD23P32628 398 aaKnown RBP3.75□□□□□ -1.81
EAR1YMR171C MRPS5P33759 307 aa3.75□□□□□ -1.81
EAR1YMR171C YKL102CP34249 101 aa3.75□□□□□ -1.81
EAR1YMR171C SRP14P38985 146 aa3.75□□□□□ -1.81
EAR1YMR171C YIL163CP40448 117 aa3.75□□□□□ -1.81
EAR1YMR171C DSK2P48510 373 aa3.75□□□□□ -1.81
EAR1YMR171C RPL9BP51401 191 aaKnown RBP3.75□□□□□ -1.81
EAR1YMR171C YNR064CP53750 290 aa3.75□□□□□ -1.81
EAR1YMR171C NAT5Q08689 176 aa3.75□□□□□ -1.81
EAR1YMR171C RPL15AP05748 204 aaKnown RBP3.74□□□□□ -1.81
EAR1YMR171C DAL82P21705 255 aa3.74□□□□□ -1.81
EAR1YMR171C TOM40P23644 387 aaKnown RBP3.74□□□□□ -1.81
EAR1YMR171C YER084WP40057 128 aa3.74□□□□□ -1.81
EAR1YMR171C PRE5P40302 234 aaKnown RBP3.74□□□□□ -1.81
EAR1YMR171C SSU72P53538 206 aaPredicted RBP3.74□□□□□ -1.81
EAR1YMR171C NRM1P53718 249 aa3.74□□□□□ -1.81
EAR1YMR171C YDR209CQ03480 137 aa3.74□□□□□ -1.81
EAR1YMR171C PAU23Q07987 124 aa3.74□□□□□ -1.81
EAR1YMR171C RFM1Q12192 310 aa3.74□□□□□ -1.81
EAR1YMR171C PAU17Q12370 124 aa3.74□□□□□ -1.81
EAR1YMR171C GEP5Q12393 293 aa3.74□□□□□ -1.81
EAR1YMR171C CSF1Q12150 2958 aa3.73□□□□□ -1.81
EAR1YMR171C SEC72P39742 193 aaKnown RBP3.73□□□□□ -1.81
EAR1YMR171C YER134CP40081 178 aa3.73□□□□□ -1.81
EAR1YMR171C RPR2P40571 144 aa3.73□□□□□ -1.81
EAR1YMR171C SIP18P50263 79 aa3.73□□□□□ -1.81
EAR1YMR171C YGL118CP53132 145 aa3.73□□□□□ -1.81
EAR1YMR171C YMR166CQ03829 368 aa3.73□□□□□ -1.81
EAR1YMR171C CUP2P15315 225 aa3.72□□□□□ -1.81
EAR1YMR171C QRI5P32344 111 aa3.72□□□□□ -1.81
EAR1YMR171C FPR2P32472 135 aa3.72□□□□□ -1.81
EAR1YMR171C PMU1P36069 295 aa3.72□□□□□ -1.81
EAR1YMR171C UTH1P36135 365 aa3.72□□□□□ -1.81
EAR1YMR171C PAM17P36147 197 aa3.72□□□□□ -1.81
EAR1YMR171C YHR173CP38864 112 aa3.72□□□□□ -1.81
EAR1YMR171C CPD1P53314 239 aa3.72□□□□□ -1.81
EAR1YMR171C ATP19P81451 68 aa3.72□□□□□ -1.81
EAR1YMR171C AYT1Q12226 474 aa3.72□□□□□ -1.81
EAR1YMR171C TPT1Q12272 230 aaKnown RBP3.72□□□□□ -1.81
EAR1YMR171C YCR024C-BQ3E7Z8 88 aa3.72□□□□□ -1.81
EAR1YMR171C YOS1Q3E834 85 aa3.72□□□□□ -1.81
EAR1YMR171C FMP27Q06179 2628 aa3.72□□□□□ -1.81
EAR1YMR171C YMR316C-AI2HB70 103 aa3.71□□□□□ -1.81
EAR1YMR171C TEM1P38987 245 aa3.71□□□□□ -1.81
EAR1YMR171C YAR068WP39564 161 aa3.71□□□□□ -1.81
EAR1YMR171C GON7P46984 123 aa3.71□□□□□ -1.81
EAR1YMR171C TDA4P47153 279 aa3.71□□□□□ -1.81
EAR1YMR171C YDR366CP87287 132 aa3.71□□□□□ -1.81
EAR1YMR171C YHP1Q04116 353 aa3.71□□□□□ -1.81
EAR1YMR171C GIM5Q04493 163 aa3.71□□□□□ -1.81
EAR1YMR171C YMR317WQ04893 1140 aa3.71□□□□□ -1.81
EAR1YMR171C CSI2Q08054 341 aa3.71□□□□□ -1.81
EAR1YMR171C YIL002W-AQ3E7Z5 69 aa3.71□□□□□ -1.81
EAR1YMR171C PIS1P06197 220 aaKnown RBP3.71□□□□□ -1.82
EAR1YMR171C TIR1P10863 254 aa3.71□□□□□ -1.82
EAR1YMR171C RPI1P23250 407 aaKnown RBP3.71□□□□□ -1.82
EAR1YMR171C YOX1P34161 385 aa3.71□□□□□ -1.82
EAR1YMR171C MTC6P38849 526 aa3.71□□□□□ -1.82
EAR1YMR171C CRZ1P53968 678 aa3.71□□□□□ -1.82
EAR1YMR171C NDE2Q07500 545 aa3.71□□□□□ -1.82
EAR1YMR171C CSM4Q08955 156 aa3.71□□□□□ -1.82
EAR1YMR171C YPL162CQ12042 273 aa3.71□□□□□ -1.82
EAR1YMR171C YDL157CQ12082 118 aa3.71□□□□□ -1.82
EAR1YMR171C SEC4P07560 215 aaKnown RBP3.7□□□□□ -1.82
EAR1YMR171C NOP1P15646 327 aaKnown RBP3.7□□□□□ -1.82
EAR1YMR171C UTR5P32630 166 aa3.7□□□□□ -1.82
EAR1YMR171C ZRT1P32804 376 aa3.7□□□□□ -1.82
EAR1YMR171C GSP1P32835 219 aaKnown RBP3.7□□□□□ -1.82
EAR1YMR171C GSP2P32836 220 aaKnown RBP3.7□□□□□ -1.82
EAR1YMR171C YCR041WP37265 110 aa3.7□□□□□ -1.82
EAR1YMR171C MIC26P50087 233 aa3.7□□□□□ -1.82
EAR1YMR171C THG1P53215 237 aaKnown RBP3.7□□□□□ -1.82
EAR1YMR171C RNH203Q12338 110 aa3.7□□□□□ -1.82
EAR1YMR171C WIP1Q2V2P8 89 aa3.7□□□□□ -1.82
EAR1YMR171C COX2P00410 251 aa3.69□□□□□ -1.82
EAR1YMR171C RPS23AP0CX29 145 aaKnown RBP3.69□□□□□ -1.82
EAR1YMR171C RPS23BP0CX30 145 aa3.69□□□□□ -1.82
EAR1YMR171C YBL071CP38185 102 aa3.69□□□□□ -1.82
EAR1YMR171C PAU7P39545 55 aa3.69□□□□□ -1.82
EAR1YMR171C MSL1P40567 111 aaPredicted RBP3.69□□□□□ -1.82
EAR1YMR171C HAC1P41546 238 aa3.69□□□□□ -1.82
EAR1YMR171C YJL028WP47062 111 aa3.69□□□□□ -1.82
EAR1YMR171C YIP1P53039 248 aa3.69□□□□□ -1.82
EAR1YMR171C YGL230CP53074 147 aa3.69□□□□□ -1.82
EAR1YMR171C MRX11Q03079 207 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 95.3 ms