RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W SNO1Q03144 224 aa3.35□□□□□ -1.87
VPS36YLR417W SPG3Q04398 127 aaPredicted RBP3.35□□□□□ -1.87
VPS36YLR417W ELP6Q04868 273 aa3.35□□□□□ -1.87
VPS36YLR417W MOT1P32333 1867 aa3.35□□□□□ -1.87
VPS36YLR417W RPL9AP05738 191 aaKnown RBP3.34□□□□□ -1.87
VPS36YLR417W YHR032W-AP0C5N6 59 aa3.34□□□□□ -1.87
VPS36YLR417W SMD3P43321 101 aaKnown RBP3.34□□□□□ -1.87
VPS36YLR417W BAT2P47176 376 aaKnown RBP3.34□□□□□ -1.87
VPS36YLR417W RPL9BP51401 191 aaKnown RBP3.34□□□□□ -1.87
VPS36YLR417W MPA43P53583 542 aaPredicted RBP3.34□□□□□ -1.87
VPS36YLR417W AKR2Q12013 749 aa3.34□□□□□ -1.87
VPS36YLR417W TDA8Q6B2U8 126 aa3.34□□□□□ -1.87
VPS36YLR417W RPL35AP0CX84 120 aaKnown RBP3.33□□□□□ -1.88
VPS36YLR417W RPL35BP0CX85 120 aaKnown RBP3.33□□□□□ -1.88
VPS36YLR417W STP22P25604 385 aa3.33□□□□□ -1.88
VPS36YLR417W SUI1P32911 108 aaKnown RBP3.33□□□□□ -1.88
VPS36YLR417W CTR2P38865 189 aa3.33□□□□□ -1.88
VPS36YLR417W TIM13P53299 105 aa3.33□□□□□ -1.88
VPS36YLR417W YPR145C-AQ2V2P0 78 aa3.33□□□□□ -1.88
VPS36YLR417W PAU19P0CE85 124 aa3.33□□□□□ -1.88
VPS36YLR417W PAU21P0CE86 164 aa3.33□□□□□ -1.88
VPS36YLR417W PAU22P0CE87 164 aa3.33□□□□□ -1.88
VPS36YLR417W PAU3P25610 124 aa3.33□□□□□ -1.88
VPS36YLR417W VMA11P32842 164 aa3.33□□□□□ -1.88
VPS36YLR417W YHL026CP38740 315 aa3.33□□□□□ -1.88
VPS36YLR417W FLX1P40464 311 aa3.33□□□□□ -1.88
VPS36YLR417W MRPL49P40858 161 aaPredicted RBP3.33□□□□□ -1.88
VPS36YLR417W CCC1P47818 322 aa3.33□□□□□ -1.88
VPS36YLR417W YGL204CP53089 101 aa3.33□□□□□ -1.88
VPS36YLR417W YGR050CP53231 118 aa3.33□□□□□ -1.88
VPS36YLR417W TMA23Q03525 211 aa3.33□□□□□ -1.88
VPS36YLR417W HNT1Q04344 158 aaKnown RBP3.33□□□□□ -1.88
VPS36YLR417W AVO2Q04749 426 aa3.33□□□□□ -1.88
VPS36YLR417W YLR036CQ07986 203 aa3.33□□□□□ -1.88
VPS36YLR417W RAD28Q12021 506 aa3.33□□□□□ -1.88
VPS36YLR417W YLR118CQ12354 227 aa3.33□□□□□ -1.88
VPS36YLR417W KIN28P06242 306 aa3.32□□□□□ -1.88
VPS36YLR417W HAP3P13434 144 aa3.32□□□□□ -1.88
VPS36YLR417W YCR101CP25607 182 aa3.32□□□□□ -1.88
VPS36YLR417W YJR111CP47148 283 aaKnown RBP3.32□□□□□ -1.88
VPS36YLR417W TRR1P29509 319 aaKnown RBP3.31□□□□□ -1.88
VPS36YLR417W YBR292CP38357 123 aa3.31□□□□□ -1.88
VPS36YLR417W RFC2P40348 353 aa3.31□□□□□ -1.88
VPS36YLR417W PGA1P53896 198 aa3.31□□□□□ -1.88
VPS36YLR417W YMR253CQ04835 414 aa3.31□□□□□ -1.88
VPS36YLR417W FRQ1Q06389 190 aa3.31□□□□□ -1.88
VPS36YLR417W UBR1P19812 1950 aa3.31□□□□□ -1.88
VPS36YLR417W SCL1P21243 252 aaKnown RBP3.3□□□□□ -1.88
VPS36YLR417W SNC2P33328 115 aa3.3□□□□□ -1.88
VPS36YLR417W HSP10P38910 106 aa3.3□□□□□ -1.88
VPS36YLR417W YIP3P53633 176 aa3.3□□□□□ -1.88
VPS36YLR417W CYT2Q00873 224 aa3.3□□□□□ -1.88
VPS36YLR417W TVP18Q04767 167 aa3.3□□□□□ -1.88
VPS36YLR417W YMR321CQ04898 105 aa3.3□□□□□ -1.88
VPS36YLR417W HRT1Q08273 121 aa3.3□□□□□ -1.88
VPS36YLR417W YLR146W-AQ2V2P1 62 aa3.3□□□□□ -1.88
VPS36YLR417W COX19Q3E731 98 aa3.3□□□□□ -1.88
VPS36YLR417W YHR214C-EQ8TGK0 99 aa3.3□□□□□ -1.88
VPS36YLR417W PMD1P32634 1753 aa3.3□□□□□ -1.88
VPS36YLR417W YOL162WP0CF19 215 aa3.3□□□□□ -1.88
VPS36YLR417W PRE1P22141 198 aaKnown RBP3.3□□□□□ -1.88
VPS36YLR417W SCO1P23833 295 aa3.3□□□□□ -1.88
VPS36YLR417W PAN3P36102 679 aaPredicted RBP3.3□□□□□ -1.88
VPS36YLR417W YBR013CP38215 129 aa3.3□□□□□ -1.88
VPS36YLR417W YJR146WP47174 117 aa3.3□□□□□ -1.88
VPS36YLR417W THI74Q04083 370 aa3.3□□□□□ -1.88
VPS36YLR417W YMR252CQ04814 134 aa3.3□□□□□ -1.88
VPS36YLR417W YNR034W-AQ3E841 98 aa3.3□□□□□ -1.88
VPS36YLR417W YPR014CQ6B0W2 109 aa3.3□□□□□ -1.88
VPS36YLR417W YLR156WP0CE96 114 aa3.29□□□□□ -1.88
VPS36YLR417W YLR159WP0CE97 114 aa3.29□□□□□ -1.88
VPS36YLR417W YLR161WP0CE98 114 aa3.29□□□□□ -1.88
VPS36YLR417W NHP6AP11632 93 aaKnown RBP3.29□□□□□ -1.88
VPS36YLR417W MRPL11P36521 249 aaPredicted RBP3.29□□□□□ -1.88
VPS36YLR417W GIM4P40005 111 aaKnown RBP3.29□□□□□ -1.88
VPS36YLR417W DLS1P40366 167 aa3.29□□□□□ -1.88
VPS36YLR417W PHS1P40857 217 aa3.29□□□□□ -1.88
VPS36YLR417W PAU5P43575 122 aa3.29□□□□□ -1.88
VPS36YLR417W RUB1Q03919 77 aa3.29□□□□□ -1.88
VPS36YLR417W YPR114WQ06107 315 aa3.29□□□□□ -1.88
VPS36YLR417W RDS3Q06835 107 aaPredicted RBP3.29□□□□□ -1.88
VPS36YLR417W PEX11Q12462 236 aa3.29□□□□□ -1.88
VPS36YLR417W FAB1P34756 2278 aa3.29□□□□□ -1.88
VPS36YLR417W LAA1P39526 2014 aa3.29□□□□□ -1.88
VPS36YLR417W CPA1P07258 411 aaKnown RBP3.28□□□□□ -1.88
VPS36YLR417W MRS1P07266 363 aa3.28□□□□□ -1.88
VPS36YLR417W TRX3P25372 127 aa3.28□□□□□ -1.88
VPS36YLR417W YEA4P40004 342 aa3.28□□□□□ -1.88
VPS36YLR417W EST3Q03096 181 aa3.28□□□□□ -1.88
VPS36YLR417W USB1Q12208 290 aaKnown RBP3.28□□□□□ -1.88
VPS36YLR417W PET20Q99373 253 aa3.28□□□□□ -1.88
VPS36YLR417W GSC2P40989 1895 aa3.28□□□□□ -1.88
VPS36YLR417W COX5BP00425 151 aa3.27□□□□□ -1.89
VPS36YLR417W DSK2P48510 373 aa3.27□□□□□ -1.89
VPS36YLR417W DIG2Q03373 323 aaKnown RBP3.27□□□□□ -1.89
VPS36YLR417W YOL160WQ08321 113 aa3.27□□□□□ -1.89
VPS36YLR417W VPS68Q12016 184 aa3.27□□□□□ -1.89
VPS36YLR417W YIL134C-AQ45U18 67 aa3.27□□□□□ -1.89
VPS36YLR417W MSW1P04803 379 aa3.27□□□□□ -1.89
VPS36YLR417W ADK1P07170 222 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 74.2 ms