RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C PCL7P40186 285 aa3.66□□□□□ -1.82
CDC42YLR229C SAS2P40963 338 aa3.66□□□□□ -1.82
CDC42YLR229C OST1P41543 476 aaKnown RBP3.66□□□□□ -1.82
CDC42YLR229C CRH1P53301 507 aa3.66□□□□□ -1.82
CDC42YLR229C YMR007WQ03675 126 aa3.66□□□□□ -1.82
CDC42YLR229C GRH1Q04410 372 aaKnown RBP3.66□□□□□ -1.82
CDC42YLR229C RIM9Q04734 239 aa3.66□□□□□ -1.82
CDC42YLR229C ATG39Q06159 398 aa3.66□□□□□ -1.82
CDC42YLR229C RAF1Q06891 181 aa3.66□□□□□ -1.82
CDC42YLR229C LDS2Q08218 356 aa3.66□□□□□ -1.82
CDC42YLR229C NCE102Q12207 173 aaRIP-Chip data3.66□□□□□ -1.82not detected
CDC42YLR229C YPS3Q12303 508 aa3.66□□□□□ -1.82
CDC42YLR229C RPL35AP0CX84 120 aaKnown RBP3.65□□□□□ -1.83
CDC42YLR229C RPL35BP0CX85 120 aaKnown RBP3.65□□□□□ -1.83
CDC42YLR229C HSP12P22943 109 aaKnown RBP3.65□□□□□ -1.83
CDC42YLR229C RPI1P23250 407 aaKnown RBP3.65□□□□□ -1.83
CDC42YLR229C CMC1P36064 111 aa3.65□□□□□ -1.83
CDC42YLR229C PRS4P38063 326 aaPredicted RBP3.65□□□□□ -1.83
CDC42YLR229C SWD3P38123 315 aa3.65□□□□□ -1.83
CDC42YLR229C YHL044WP38727 235 aa3.65□□□□□ -1.83
CDC42YLR229C PSD1P39006 500 aa3.65□□□□□ -1.83
CDC42YLR229C YER084WP40057 128 aa3.65□□□□□ -1.83
CDC42YLR229C UBC13P52490 153 aa3.65□□□□□ -1.83
CDC42YLR229C ATP19P81451 68 aa3.65□□□□□ -1.83
CDC42YLR229C UPS3Q04006 179 aa3.65□□□□□ -1.83
CDC42YLR229C MSC3Q05812 728 aa3.65□□□□□ -1.83
CDC42YLR229C RRS1Q08746 203 aaKnown RBP3.65□□□□□ -1.83
CDC42YLR229C FIT3Q08907 204 aa3.65□□□□□ -1.83
CDC42YLR229C MPD1Q12404 318 aaKnown RBP3.65□□□□□ -1.83
CDC42YLR229C HFA1P32874 2273 aa3.65□□□□□ -1.83
CDC42YLR229C VPS63O13549 108 aa3.64□□□□□ -1.83
CDC42YLR229C HEM4P06174 275 aa3.64□□□□□ -1.83
CDC42YLR229C RPL12AP0CX53 165 aaKnown RBP3.64□□□□□ -1.83
CDC42YLR229C RPL12BP0CX54 165 aa3.64□□□□□ -1.83
CDC42YLR229C YFL068WP0CX99 160 aa3.64□□□□□ -1.83
CDC42YLR229C YLL066W-AP0CY00 160 aa3.64□□□□□ -1.83
CDC42YLR229C YLL067W-AP0CY01 160 aa3.64□□□□□ -1.83
CDC42YLR229C MDM10P18409 493 aa3.64□□□□□ -1.83
CDC42YLR229C RPS2P25443 254 aaKnown RBP3.64□□□□□ -1.83
CDC42YLR229C IMP1P28627 190 aa3.64□□□□□ -1.83
CDC42YLR229C QRI5P32344 111 aa3.64□□□□□ -1.83
CDC42YLR229C ZRT1P32804 376 aa3.64□□□□□ -1.83
CDC42YLR229C GSP1P32835 219 aaKnown RBP3.64□□□□□ -1.83
CDC42YLR229C GSP2P32836 220 aaKnown RBP3.64□□□□□ -1.83
CDC42YLR229C YPT53P36019 220 aa3.64□□□□□ -1.83
CDC42YLR229C DOG2P38773 246 aa3.64□□□□□ -1.83
CDC42YLR229C SRP14P38985 146 aa3.64□□□□□ -1.83
CDC42YLR229C BDH1P39714 382 aa3.64□□□□□ -1.83
CDC42YLR229C YIL012WP40551 113 aa3.64□□□□□ -1.83
CDC42YLR229C EGT2P42835 1041 aa3.64□□□□□ -1.83
CDC42YLR229C TDA4P47153 279 aa3.64□□□□□ -1.83
CDC42YLR229C SIP18P50263 79 aa3.64□□□□□ -1.83
CDC42YLR229C CAB4P53332 305 aa3.64□□□□□ -1.83
CDC42YLR229C YGL258W-AQ3E740 77 aa3.64□□□□□ -1.83
CDC42YLR229C MBF1O14467 151 aaKnown RBP3.63□□□□□ -1.83
CDC42YLR229C TIR1P10863 254 aa3.63□□□□□ -1.83
CDC42YLR229C CPR1P14832 162 aaKnown RBP3.63□□□□□ -1.83
CDC42YLR229C CUP2P15315 225 aa3.63□□□□□ -1.83
CDC42YLR229C SEC11P15367 167 aa3.63□□□□□ -1.83
CDC42YLR229C YMR31P19955 123 aa3.63□□□□□ -1.83
CDC42YLR229C FPR2P32472 135 aa3.63□□□□□ -1.83
CDC42YLR229C YKR070WP36151 352 aaKnown RBP3.63□□□□□ -1.83
CDC42YLR229C LSM2P38203 95 aaKnown RBP3.63□□□□□ -1.83
CDC42YLR229C YHR173CP38864 112 aa3.63□□□□□ -1.83
CDC42YLR229C PAU7P39545 55 aa3.63□□□□□ -1.83
CDC42YLR229C BLM10P43583 2143 aa3.63□□□□□ -1.83
CDC42YLR229C CPD1P53314 239 aa3.63□□□□□ -1.83
CDC42YLR229C LPP1Q04396 274 aa3.63□□□□□ -1.83
CDC42YLR229C YPL278CQ08990 100 aa3.63□□□□□ -1.83
CDC42YLR229C FOL3Q12676 427 aaPredicted RBP3.63□□□□□ -1.83
CDC42YLR229C WIP1Q2V2P8 89 aa3.63□□□□□ -1.83
CDC42YLR229C YOR192C-CQ3E736 78 aa3.63□□□□□ -1.83
CDC42YLR229C BOL1Q3E793 110 aa3.63□□□□□ -1.83
CDC42YLR229C YCR024C-BQ3E7Z8 88 aa3.63□□□□□ -1.83
CDC42YLR229C TOM40P23644 387 aaKnown RBP3.62□□□□□ -1.83
CDC42YLR229C DAL80P26343 269 aa3.62□□□□□ -1.83
CDC42YLR229C PHD1P36093 366 aa3.62□□□□□ -1.83
CDC42YLR229C PAM17P36147 197 aa3.62□□□□□ -1.83
CDC42YLR229C YER188WP40103 239 aa3.62□□□□□ -1.83
CDC42YLR229C YJL028WP47062 111 aa3.62□□□□□ -1.83
CDC42YLR229C YJR015WP47090 510 aa3.62□□□□□ -1.83
CDC42YLR229C LIP2Q06005 328 aa3.62□□□□□ -1.83
CDC42YLR229C YOL118CQ08259 102 aa3.62□□□□□ -1.83
CDC42YLR229C FSF1Q12029 327 aaKnown RBP3.62□□□□□ -1.83
CDC42YLR229C RNH203Q12338 110 aa3.62□□□□□ -1.83
CDC42YLR229C GEP5Q12393 293 aa3.62□□□□□ -1.83
CDC42YLR229C CYC3P06182 269 aa3.61□□□□□ -1.83
CDC42YLR229C MRS1P07266 363 aa3.61□□□□□ -1.83
CDC42YLR229C ATP10P18496 279 aa3.61□□□□□ -1.83
CDC42YLR229C HYP2P23301 157 aaKnown RBP3.61□□□□□ -1.83
CDC42YLR229C ROX3P25046 220 aa3.61□□□□□ -1.83
CDC42YLR229C MIG1P27705 504 aa3.61□□□□□ -1.83
CDC42YLR229C YKL044WP36092 106 aa3.61□□□□□ -1.83
CDC42YLR229C YIL163CP40448 117 aa3.61□□□□□ -1.83
CDC42YLR229C ABM1P47146 123 aa3.61□□□□□ -1.83
CDC42YLR229C DSK2P48510 373 aa3.61□□□□□ -1.83
CDC42YLR229C WSC2P53832 503 aa3.61□□□□□ -1.83
CDC42YLR229C HSK3P69852 69 aa3.61□□□□□ -1.83
CDC42YLR229C POC4Q12245 148 aaPredicted RBP3.61□□□□□ -1.83
CDC42YLR229C YIL102C-AQ2V2P5 75 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms