RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CBF5	YLR175W	SDH8	P38345	138 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	CYB5	P40312	120 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	POR2	P40478	281 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	DSK2	P48510	373 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	TIM21	P53220	239 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	CPD1	P53314	239 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	CAB4	P53332	305 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	HHO1	P53551	258 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	MRX11	Q03079	207 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	AYT1	Q12226	474 aa		3.59	□□□□□ -1.84
CBF5	YLR175W	COX2	P00410	251 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	ADH3	P07246	375 aa	Known RBP	3.58	□□□□□ -1.84
CBF5	YLR175W	DDI2	P0CH63	225 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	DDI3	P0CH64	225 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	LAC1	P28496	418 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	HMX1	P32339	317 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	RPS0A	P32905	252 aa	Known RBP	3.58	□□□□□ -1.84
CBF5	YLR175W	YNK1	P36010	153 aa	Known RBP	3.58	□□□□□ -1.84
CBF5	YLR175W	MRPL4	P36517	319 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	TRS20	P38334	175 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	GLE2	P40066	365 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	BNS1	P50084	137 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	SNO1	Q03144	224 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	YML108W	Q03759	105 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	LOA1	Q06508	300 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	ATX2	Q12067	313 aa		3.58	□□□□□ -1.84
CBF5	YLR175W	MRPL23	Q12487	163 aa	Predicted RBP	3.58	□□□□□ -1.84
CBF5	YLR175W	RPS2	P25443	254 aa	Known RBP	3.57	□□□□□ -1.84
CBF5	YLR175W	MRPS9	P38120	278 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	YPT10	P38146	199 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	LSM2	P38203	95 aa	Known RBP	3.57	□□□□□ -1.84
CBF5	YLR175W	IMD2	P38697	523 aa	Known RBP	3.57	□□□□□ -1.84
CBF5	YLR175W	YHR173C	P38864	112 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	GPI2	P46961	280 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	TOS8	P53147	276 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	DUG3	P53871	357 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	LDS2	Q08218	356 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	MSA1	Q08471	629 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	FIT2	Q08906	153 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	PRM3	Q08931	133 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	YLR118C	Q12354	227 aa		3.57	□□□□□ -1.84
CBF5	YLR175W	MRS1	P07266	363 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	YER190C-B	P0CX94	160 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	YEL077W-A	P0CX95	160 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	YGR296C-B	P0CX96	160 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	YPL283W-B	P0CX97	160 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	YPR204C-A	P0CX98	160 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	YFL068W	P0CX99	160 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	YLL066W-A	P0CY00	160 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	YLL067W-A	P0CY01	160 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	COQ3	P27680	312 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	ATG8	P38182	117 aa	RIP-Chip data	3.56	□□□□□ -1.84	not detected
CBF5	YLR175W	HSP10	P38910	106 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	PGD1	P40356	397 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	YPI1	P43587	155 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	FIP1	P45976	327 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	AIM24	P47127	394 aa		3.56	□□□□□ -1.84
CBF5	YLR175W	SRP21	P32342	167 aa		3.55	□□□□□ -1.84
CBF5	YLR175W	NTF2	P33331	125 aa	Known RBP	3.55	□□□□□ -1.84
CBF5	YLR175W	YKL102C	P34249	101 aa		3.55	□□□□□ -1.84
CBF5	YLR175W	SNF11	P38956	169 aa		3.55	□□□□□ -1.84
CBF5	YLR175W	PAU15	P40585	124 aa		3.55	□□□□□ -1.84
CBF5	YLR175W	DUO1	P53168	247 aa	Known RBP	3.55	□□□□□ -1.84
CBF5	YLR175W	UBC7	Q02159	165 aa		3.55	□□□□□ -1.84
CBF5	YLR175W	YPR145C-A	Q2V2P0	78 aa		3.55	□□□□□ -1.84
CBF5	YLR175W	YER175W-A	Q8TGU4	54 aa		3.55	□□□□□ -1.84
CBF5	YLR175W	YBR126W-A	Q8TGU7	68 aa		3.55	□□□□□ -1.84
CBF5	YLR175W	FMP49	A0A023PZB3	126 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	RPB3	P16370	318 aa	Known RBP	3.54	□□□□□ -1.84
CBF5	YLR175W	CDC43	P18898	376 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	MRPL20	P22354	195 aa	Predicted RBP	3.54	□□□□□ -1.84
CBF5	YLR175W	TIR2	P33890	251 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	VMA21	P41806	77 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	DAN1	P47178	298 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	MGA1	P53050	456 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	ATP19	P81451	68 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	ZEO1	Q08245	113 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	YOP1	Q12402	180 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	ERG27	Q12452	347 aa	Known RBP	3.54	□□□□□ -1.84
CBF5	YLR175W	HTB2	P02294	131 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	TIR1	P10863	254 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	NHP6A	P11632	93 aa	Known RBP	3.54	□□□□□ -1.84
CBF5	YLR175W	UTR5	P32630	166 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	SDH4	P37298	181 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	AME1	P38313	324 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	SNU13	P39990	126 aa	Known RBP	3.54	□□□□□ -1.84
CBF5	YLR175W	RPA43	P46669	326 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	HAM1	P47119	197 aa	Known RBP	3.54	□□□□□ -1.84
CBF5	YLR175W	YDL186W	P48568	277 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	YGL185C	P53100	379 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	DAD3	P69850	94 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	YMR181C	Q03231	154 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	IZH1	Q03419	316 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	RAV2	Q03956	351 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	ATG39	Q06159	398 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	SNU23	Q12368	194 aa	Predicted RBP	3.54	□□□□□ -1.84
CBF5	YLR175W	YGR035W-A	Q45U48	73 aa		3.54	□□□□□ -1.84
CBF5	YLR175W	YHR212W-A	P0CX91	67 aa		3.53	□□□□□ -1.84
CBF5	YLR175W	PHD1	P36093	366 aa		3.53	□□□□□ -1.84
CBF5	YLR175W	SRP14	P38985	146 aa		3.53	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms