RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W PTC1P35182 281 aa3.11□□□□□ -1.91
SOF1YLL011W TRA1P38811 3744 aa3.11□□□□□ -1.91
SOF1YLL011W RPC19P28000 142 aaKnown RBP3.1□□□□□ -1.91
SOF1YLL011W YJL218WP40892 196 aaKnown RBP3.1□□□□□ -1.91
SOF1YLL011W YGR039WP53225 103 aa3.1□□□□□ -1.91
SOF1YLL011W CGI121Q03705 181 aaKnown RBP3.1□□□□□ -1.91
SOF1YLL011W ATP14Q12349 124 aa3.1□□□□□ -1.91
SOF1YLL011W FPR1P20081 114 aaKnown RBP3.09□□□□□ -1.91
SOF1YLL011W SRP21P32342 167 aa3.09□□□□□ -1.91
SOF1YLL011W UMP1P38293 148 aa3.09□□□□□ -1.91
SOF1YLL011W YBR220CP38318 560 aa3.09□□□□□ -1.91
SOF1YLL011W TRS20P38334 175 aa3.09□□□□□ -1.91
SOF1YLL011W PGD1P40356 397 aa3.09□□□□□ -1.91
SOF1YLL011W GPI2P46961 280 aa3.09□□□□□ -1.91
SOF1YLL011W MPC3P53311 146 aa3.09□□□□□ -1.91
SOF1YLL011W VPS28Q02767 242 aa3.09□□□□□ -1.91
SOF1YLL011W MRPS8Q03799 155 aa3.09□□□□□ -1.91
SOF1YLL011W SDH7Q04401 133 aa3.09□□□□□ -1.91
SOF1YLL011W NEJ1Q06148 342 aa3.09□□□□□ -1.91
SOF1YLL011W SPC3Q12133 184 aa3.09□□□□□ -1.91
SOF1YLL011W RPS23AP0CX29 145 aaKnown RBP3.09□□□□□ -1.92
SOF1YLL011W RPS23BP0CX30 145 aa3.09□□□□□ -1.92
SOF1YLL011W HTD2P38790 280 aaKnown RBP3.09□□□□□ -1.92
SOF1YLL011W YHR180WP38868 163 aa3.09□□□□□ -1.92
SOF1YLL011W NSA2P40078 261 aaKnown RBP3.09□□□□□ -1.92
SOF1YLL011W YIL059CP40520 121 aa3.09□□□□□ -1.92
SOF1YLL011W SLM2P53955 656 aa3.09□□□□□ -1.92
SOF1YLL011W YKR005CQ02203 525 aa3.09□□□□□ -1.92
SOF1YLL011W CNL1Q06333 122 aa3.09□□□□□ -1.92
SOF1YLL011W FCY1Q12178 158 aa3.09□□□□□ -1.92
SOF1YLL011W GCN1P33892 2672 aaKnown RBP3.08□□□□□ -1.92
SOF1YLL011W PHO13P19881 312 aa3.08□□□□□ -1.92
SOF1YLL011W HSP30P25619 332 aa3.08□□□□□ -1.92
SOF1YLL011W SNC2P33328 115 aa3.08□□□□□ -1.92
SOF1YLL011W CUP9P41817 306 aa3.08□□□□□ -1.92
SOF1YLL011W APS3P47064 194 aa3.08□□□□□ -1.92
SOF1YLL011W YMR295CQ03559 197 aa3.08□□□□□ -1.92
SOF1YLL011W SCW10Q04951 389 aa3.08□□□□□ -1.92
SOF1YLL011W ATP20Q12233 115 aa3.08□□□□□ -1.92
SOF1YLL011W ACC1Q00955 2233 aaKnown RBP3.07□□□□□ -1.92
SOF1YLL011W LAA1P39526 2014 aa3.07□□□□□ -1.92
SOF1YLL011W YHR140WP38842 239 aa3.07□□□□□ -1.92
SOF1YLL011W YEL028WP39989 153 aa3.07□□□□□ -1.92
SOF1YLL011W SPC25P40014 221 aa3.07□□□□□ -1.92
SOF1YLL011W YER084WP40057 128 aa3.07□□□□□ -1.92
SOF1YLL011W YDR114CQ04597 100 aa3.07□□□□□ -1.92
SOF1YLL011W PRP11Q07350 266 aaPredicted RBP3.07□□□□□ -1.92
SOF1YLL011W CSF1Q12150 2958 aa3.07□□□□□ -1.92
SOF1YLL011W RAD6P06104 172 aa3.06□□□□□ -1.92
SOF1YLL011W MRP49P32388 137 aa3.06□□□□□ -1.92
SOF1YLL011W SRX1P36077 127 aa3.06□□□□□ -1.92
SOF1YLL011W MRPL24P36525 258 aaPredicted RBP3.06□□□□□ -1.92
SOF1YLL011W YER137CP40083 148 aaKnown RBP3.06□□□□□ -1.92
SOF1YLL011W YMR253CQ04835 414 aa3.06□□□□□ -1.92
SOF1YLL011W SYM1Q06563 197 aa3.06□□□□□ -1.92
SOF1YLL011W FSF1Q12029 327 aaKnown RBP3.06□□□□□ -1.92
SOF1YLL011W FMP49A0A023PZB3 126 aa3.05□□□□□ -1.92
SOF1YLL011W RPS1BP23248 255 aaKnown RBP3.05□□□□□ -1.92
SOF1YLL011W UGX2P32772 223 aa3.05□□□□□ -1.92
SOF1YLL011W SUI1P32911 108 aaKnown RBP3.05□□□□□ -1.92
SOF1YLL011W PAM17P36147 197 aa3.05□□□□□ -1.92
SOF1YLL011W VMA7P39111 118 aa3.05□□□□□ -1.92
SOF1YLL011W DOC1P53068 250 aa3.05□□□□□ -1.92
SOF1YLL011W YNR077CP53758 84 aa3.05□□□□□ -1.92
SOF1YLL011W YDR391CQ04170 232 aa3.05□□□□□ -1.92
SOF1YLL011W YIR021W-AQ3E739 70 aa3.05□□□□□ -1.92
SOF1YLL011W YNL277W-AQ3E7Z0 62 aa3.05□□□□□ -1.92
SOF1YLL011W PHO85P17157 305 aa3.04□□□□□ -1.92
SOF1YLL011W FZF1P32805 299 aa3.04□□□□□ -1.92
SOF1YLL011W AYR1P40471 297 aa3.04□□□□□ -1.92
SOF1YLL011W HPM1P40481 377 aa3.04□□□□□ -1.92
SOF1YLL011W ARL3Q02804 198 aa3.04□□□□□ -1.92
SOF1YLL011W EST3Q03096 181 aa3.04□□□□□ -1.92
SOF1YLL011W SHH3Q04487 196 aa3.04□□□□□ -1.92
SOF1YLL011W FEX1Q08913 375 aa3.04□□□□□ -1.92
SOF1YLL011W FEX2Q08991 375 aa3.04□□□□□ -1.92
SOF1YLL011W BOL1Q3E793 110 aa3.04□□□□□ -1.92
SOF1YLL011W SCM4P32564 187 aa3.03□□□□□ -1.92
SOF1YLL011W YET1P35723 206 aa3.03□□□□□ -1.92
SOF1YLL011W YRA2P36036 203 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
SOF1YLL011W RRT1P38192 103 aa3.03□□□□□ -1.92
SOF1YLL011W YIR035CP40579 254 aa3.03□□□□□ -1.92
SOF1YLL011W BUD25P85052 153 aa3.03□□□□□ -1.92
SOF1YLL011W MZM1Q03429 123 aaPredicted RBP3.03□□□□□ -1.92
SOF1YLL011W AHT1P29589 182 aa3.03□□□□□ -1.93
SOF1YLL011W TFC1P32367 649 aa3.03□□□□□ -1.93
SOF1YLL011W HYM1P32464 399 aa3.03□□□□□ -1.93
SOF1YLL011W SHB17P36136 271 aaKnown RBP3.03□□□□□ -1.93
SOF1YLL011W YER135CP40082 130 aa3.03□□□□□ -1.93
SOF1YLL011W RIO2P40160 425 aaKnown RBP3.03□□□□□ -1.93
SOF1YLL011W RPL33BP41056 107 aaKnown RBP3.03□□□□□ -1.93
SOF1YLL011W YJL027CP47063 138 aaPredicted RBP3.03□□□□□ -1.93
SOF1YLL011W YNL033WP53964 284 aa3.03□□□□□ -1.93
SOF1YLL011W YNL019CP53975 284 aa3.03□□□□□ -1.93
SOF1YLL011W YOR304C-AO14468 76 aa3.02□□□□□ -1.93
SOF1YLL011W YNR062CP53748 327 aa3.02□□□□□ -1.93
SOF1YLL011W YDR102CQ03864 110 aa3.02□□□□□ -1.93
SOF1YLL011W RUB1Q03919 77 aa3.02□□□□□ -1.93
SOF1YLL011W IRC23Q08416 157 aa3.02□□□□□ -1.93
SOF1YLL011W YLR099W-AQ3E798 87 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 134 ms