RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C HSP30P25619 332 aa1.39□□□□□ -2.19
SHE2YKL130C PAM17P36147 197 aa1.39□□□□□ -2.19
SHE2YKL130C CSH1P38287 376 aa1.39□□□□□ -2.19
SHE2YKL130C SLM6P38343 150 aa1.39□□□□□ -2.19
SHE2YKL130C PEP8P40335 379 aa1.39□□□□□ -2.19
SHE2YKL130C DLS1P40366 167 aa1.39□□□□□ -2.19
SHE2YKL130C AYR1P40471 297 aa1.39□□□□□ -2.19
SHE2YKL130C APQ12P40532 138 aa1.39□□□□□ -2.19
SHE2YKL130C YKR005CQ02203 525 aa1.39□□□□□ -2.19
SHE2YKL130C NKP2Q06162 153 aa1.39□□□□□ -2.19
SHE2YKL130C FYV12Q08559 129 aa1.39□□□□□ -2.19
SHE2YKL130C RAD28Q12021 506 aa1.39□□□□□ -2.19
SHE2YKL130C ATP20Q12233 115 aa1.39□□□□□ -2.19
SHE2YKL130C YDR034W-BQ6Q5X2 51 aa1.39□□□□□ -2.19
SHE2YKL130C RAD6P06104 172 aa1.38□□□□□ -2.19
SHE2YKL130C RPL40AP0CH08 128 aaKnown RBP1.38□□□□□ -2.19
SHE2YKL130C RPL40BP0CH09 128 aaKnown RBP1.38□□□□□ -2.19
SHE2YKL130C RPL2AP0CX45 254 aaKnown RBP1.38□□□□□ -2.19
SHE2YKL130C RPL2BP0CX46 254 aaKnown RBP1.38□□□□□ -2.19
SHE2YKL130C PHO85P17157 305 aa1.38□□□□□ -2.19
SHE2YKL130C TMA19P35691 167 aaKnown RBP1.38□□□□□ -2.19
SHE2YKL130C YBR220CP38318 560 aa1.38□□□□□ -2.19
SHE2YKL130C FYV4P38783 130 aaPredicted RBP1.38□□□□□ -2.19
SHE2YKL130C SOK1P40317 901 aa1.38□□□□□ -2.19
SHE2YKL130C YNL033WP53964 284 aa1.38□□□□□ -2.19
SHE2YKL130C HHT1P61830 136 aa1.38□□□□□ -2.19
SHE2YKL130C PKR1Q03880 122 aaKnown RBP1.38□□□□□ -2.19
SHE2YKL130C RAV2Q03956 351 aa1.38□□□□□ -2.19
SHE2YKL130C YPR174CQ06616 221 aaPredicted RBP1.38□□□□□ -2.19
SHE2YKL130C YPR202WQ08993 238 aa1.38□□□□□ -2.19
SHE2YKL130C YPR013CQ12145 317 aa1.38□□□□□ -2.19
SHE2YKL130C TOR1P35169 2470 aa1.37□□□□□ -2.19
SHE2YKL130C ATP5P09457 212 aa1.37□□□□□ -2.19
SHE2YKL130C RPL30P14120 105 aaKnown RBP1.37□□□□□ -2.19
SHE2YKL130C CPR5P35176 225 aa1.37□□□□□ -2.19
SHE2YKL130C SFK1P35735 353 aa1.37□□□□□ -2.19
SHE2YKL130C RRT1P38192 103 aa1.37□□□□□ -2.19
SHE2YKL130C VMA22P38784 181 aa1.37□□□□□ -2.19
SHE2YKL130C RIO2P40160 425 aaKnown RBP1.37□□□□□ -2.19
SHE2YKL130C ORM1P53224 222 aa1.37□□□□□ -2.19
SHE2YKL130C YDC1Q02896 317 aa1.37□□□□□ -2.19
SHE2YKL130C YHR086W-AQ3E746 53 aa1.37□□□□□ -2.19
SHE2YKL130C TOR2P32600 2474 aaKnown RBP1.37□□□□□ -2.19
SHE2YKL130C CUP1-1P0CX80 61 aa1.36□□□□□ -2.19
SHE2YKL130C CUP1-2P0CX81 61 aa1.36□□□□□ -2.19
SHE2YKL130C UBC8P28263 218 aa1.36□□□□□ -2.19
SHE2YKL130C YER135CP40082 130 aa1.36□□□□□ -2.19
SHE2YKL130C YPL073CP40323 161 aa1.36□□□□□ -2.19
SHE2YKL130C DAD4P69851 72 aa1.36□□□□□ -2.19
SHE2YKL130C YDR391CQ04170 232 aa1.36□□□□□ -2.19
SHE2YKL130C SYM1Q06563 197 aa1.36□□□□□ -2.19
SHE2YKL130C YHR007C-AQ07074 71 aa1.36□□□□□ -2.19
SHE2YKL130C PRP11Q07350 266 aaPredicted RBP1.36□□□□□ -2.19
SHE2YKL130C YPD1Q07688 167 aa1.36□□□□□ -2.19
SHE2YKL130C YOR015WQ12169 119 aa1.36□□□□□ -2.19
SHE2YKL130C MSB2P32334 1306 aa1.36□□□□□ -2.19
SHE2YKL130C FLO9P39712 1322 aa1.36□□□□□ -2.19
SHE2YKL130C GSP2P32836 220 aaKnown RBP1.35□□□□□ -2.19
SHE2YKL130C PTC1P35182 281 aa1.35□□□□□ -2.19
SHE2YKL130C SRX1P36077 127 aa1.35□□□□□ -2.19
SHE2YKL130C IPI1P38803 334 aaPredicted RBP1.35□□□□□ -2.19
SHE2YKL130C YEL073CP39974 107 aa1.35□□□□□ -2.19
SHE2YKL130C YEL028WP39989 153 aa1.35□□□□□ -2.19
SHE2YKL130C PIR1Q03178 341 aa1.35□□□□□ -2.19
SHE2YKL130C MZM1Q03429 123 aaPredicted RBP1.35□□□□□ -2.19
SHE2YKL130C RNH202Q05635 350 aa1.35□□□□□ -2.19
SHE2YKL130C MDM35O60200 86 aa1.34□□□□□ -2.19
SHE2YKL130C RPL22AP05749 121 aaKnown RBP1.34□□□□□ -2.19
SHE2YKL130C FPR1P20081 114 aaKnown RBP1.34□□□□□ -2.19
SHE2YKL130C UPS2P35200 230 aa1.34□□□□□ -2.19
SHE2YKL130C YRA2P36036 203 aaKnown RBP RIP-Chip data1.34□□□□□ -2.19not detected
SHE2YKL130C HTD2P38790 280 aaKnown RBP1.34□□□□□ -2.19
SHE2YKL130C CCC1P47818 322 aa1.34□□□□□ -2.19
SHE2YKL130C RBL2P48606 106 aaKnown RBP1.34□□□□□ -2.19
SHE2YKL130C YGL193CP53097 103 aa1.34□□□□□ -2.19
SHE2YKL130C THG1P53215 237 aaKnown RBP1.34□□□□□ -2.19
SHE2YKL130C DML1Q03652 475 aa1.34□□□□□ -2.19
SHE2YKL130C HRD1Q08109 551 aa1.34□□□□□ -2.19
SHE2YKL130C YOR381W-AQ3E804 55 aa1.34□□□□□ -2.19
SHE2YKL130C TOM1Q03280 3268 aa1.34□□□□□ -2.2
SHE2YKL130C YLR422WQ06409 1932 aa1.33□□□□□ -2.2
SHE2YKL130C COX8P04039 78 aa1.33□□□□□ -2.2
SHE2YKL130C ACP1P32463 125 aa1.33□□□□□ -2.2
SHE2YKL130C YBR219CP38317 127 aa1.33□□□□□ -2.2
SHE2YKL130C YHL018WP38744 120 aaPredicted RBP1.33□□□□□ -2.2
SHE2YKL130C YER181CP40097 107 aa1.33□□□□□ -2.2
SHE2YKL130C FIP1P45976 327 aa1.33□□□□□ -2.2
SHE2YKL130C YJR015WP47090 510 aa1.33□□□□□ -2.2
SHE2YKL130C PAC10P48363 199 aa1.33□□□□□ -2.2
SHE2YKL130C TIM8P57744 87 aa1.33□□□□□ -2.2
SHE2YKL130C LIP1Q03579 150 aa1.33□□□□□ -2.2
SHE2YKL130C YDR102CQ03864 110 aa1.33□□□□□ -2.2
SHE2YKL130C UPS3Q04006 179 aa1.33□□□□□ -2.2
SHE2YKL130C RIM9Q04734 239 aa1.33□□□□□ -2.2
SHE2YKL130C SPC2Q04969 178 aa1.33□□□□□ -2.2
SHE2YKL130C NUM1Q00402 2748 aa1.33□□□□□ -2.2
SHE2YKL130C YKR045CP36138 183 aa1.32□□□□□ -2.2
SHE2YKL130C POP7P38291 140 aa1.32□□□□□ -2.2
SHE2YKL130C NSE4P43124 402 aa1.32□□□□□ -2.2
SHE2YKL130C ALB1P47019 175 aaPredicted RBP1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms