RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W NMA1Q06178 401 aaKnown RBP2.59□□□□□ -1.99
SPC42YKL042W RCF2P53721 224 aa2.58□□□□□ -2
SPC42YKL042W ATP19P81451 68 aa2.58□□□□□ -2
SPC42YKL042W COF1Q03048 143 aaKnown RBP2.58□□□□□ -2
SPC42YKL042W KEI1Q06346 221 aa2.58□□□□□ -2
SPC42YKL042W YGL041W-AP0C5N3 154 aa2.57□□□□□ -2
SPC42YKL042W SUI1P32911 108 aaKnown RBP2.57□□□□□ -2
SPC42YKL042W YBR242WP38331 238 aa2.57□□□□□ -2
SPC42YKL042W HHO1P53551 258 aa2.57□□□□□ -2
SPC42YKL042W SCS22Q6Q595 175 aa2.57□□□□□ -2
SPC42YKL042W CYC2P38909 366 aa2.56□□□□□ -2
SPC42YKL042W IRC19Q07843 230 aa2.56□□□□□ -2
SPC42YKL042W RPC19P28000 142 aaKnown RBP2.55□□□□□ -2
SPC42YKL042W ACP1P32463 125 aa2.55□□□□□ -2
SPC42YKL042W YGR039WP53225 103 aa2.55□□□□□ -2
SPC42YKL042W RIB3Q99258 208 aa2.55□□□□□ -2
SPC42YKL042W SHB17P36136 271 aaKnown RBP2.54□□□□□ -2
SPC42YKL042W MRPL15P36523 253 aa2.54□□□□□ -2
SPC42YKL042W YEL014CP39999 101 aa2.54□□□□□ -2
SPC42YKL042W CMC4Q3E7A9 73 aa2.54□□□□□ -2
SPC42YKL042W VAR1P02381 398 aa2.53□□□□□ -2
SPC42YKL042W PRE1P22141 198 aaKnown RBP2.53□□□□□ -2
SPC42YKL042W YGL230CP53074 147 aa2.53□□□□□ -2
SPC42YKL042W YGL204CP53089 101 aa2.53□□□□□ -2
SPC42YKL042W CSN9Q03981 162 aa2.53□□□□□ -2
SPC42YKL042W GLC8P41818 229 aa2.52□□□□□ -2.01
SPC42YKL042W YGR042WP53227 271 aa2.52□□□□□ -2.01
SPC42YKL042W FIT1Q04433 528 aa2.52□□□□□ -2.01
SPC42YKL042W SPC3Q12133 184 aa2.52□□□□□ -2.01
SPC42YKL042W HSP150P32478 413 aa2.51□□□□□ -2.01
SPC42YKL042W GIM4P40005 111 aaKnown RBP2.51□□□□□ -2.01
SPC42YKL042W PHB1P40961 287 aa2.51□□□□□ -2.01
SPC42YKL042W SPC2Q04969 178 aa2.51□□□□□ -2.01
SPC42YKL042W ECM31P38122 312 aa2.5□□□□□ -2.01
SPC42YKL042W YPR203WQ08994 102 aa2.5□□□□□ -2.01
SPC42YKL042W KIN28P06242 306 aa2.49□□□□□ -2.01
SPC42YKL042W APS3P47064 194 aa2.49□□□□□ -2.01
SPC42YKL042W YPR153WQ06537 140 aa2.49□□□□□ -2.01
SPC42YKL042W POP7P38291 140 aa2.48□□□□□ -2.01
SPC42YKL042W YHR140WP38842 239 aa2.48□□□□□ -2.01
SPC42YKL042W IPT1P38954 527 aa2.48□□□□□ -2.01
SPC42YKL042W UBR1P19812 1950 aa2.48□□□□□ -2.01
SPC42YKL042W YKR070WP36151 352 aaKnown RBP2.47□□□□□ -2.01
SPC42YKL042W YFL051CP43552 160 aa2.47□□□□□ -2.01
SPC42YKL042W COX5BP00425 151 aa2.46□□□□□ -2.02
SPC42YKL042W YHL037CP38733 133 aa2.46□□□□□ -2.02
SPC42YKL042W SPG1P50088 95 aa2.46□□□□□ -2.02
SPC42YKL042W RPS1BP23248 255 aaKnown RBP2.44□□□□□ -2.02
SPC42YKL042W VMA10P48836 114 aaKnown RBP2.44□□□□□ -2.02
SPC42YKL042W DIE2P50076 525 aa2.44□□□□□ -2.02
SPC42YKL042W EMC4P53073 190 aa2.44□□□□□ -2.02
SPC42YKL042W YNL019CP53975 284 aa2.44□□□□□ -2.02
SPC42YKL042W VAM10Q08474 114 aa2.44□□□□□ -2.02
SPC42YKL042W FCY1Q12178 158 aa2.44□□□□□ -2.02
SPC42YKL042W YLR361C-AQ3E795 98 aa2.44□□□□□ -2.02
SPC42YKL042W FYV5P25585 152 aa2.43□□□□□ -2.02
SPC42YKL042W SUA7P29055 345 aaPredicted RBP2.43□□□□□ -2.02
SPC42YKL042W LSM8P47093 109 aaKnown RBP2.43□□□□□ -2.02
SPC42YKL042W GPI11Q06636 219 aa2.43□□□□□ -2.02
SPC42YKL042W HUT1Q12520 339 aa2.43□□□□□ -2.02
SPC42YKL042W NHP6AP11632 93 aaKnown RBP2.42□□□□□ -2.02
SPC42YKL042W HYP2P23301 157 aaKnown RBP2.42□□□□□ -2.02
SPC42YKL042W YCL001W-AP87012 153 aa2.42□□□□□ -2.02
SPC42YKL042W SOM1Q05676 74 aa2.42□□□□□ -2.02
SPC42YKL042W DDP1Q99321 188 aaKnown RBP2.42□□□□□ -2.02
SPC42YKL042W RPL14AP36105 138 aaKnown RBP2.41□□□□□ -2.02
SPC42YKL042W YBR027CP38220 110 aa2.41□□□□□ -2.02
SPC42YKL042W RPL14BP38754 138 aaKnown RBP2.41□□□□□ -2.02
SPC42YKL042W DCV1P43595 202 aa2.41□□□□□ -2.02
SPC42YKL042W YMR007WQ03675 126 aa2.41□□□□□ -2.02
SPC42YKL042W YDR278CQ05612 105 aa2.41□□□□□ -2.02
SPC42YKL042W RAF1Q06891 181 aa2.41□□□□□ -2.02
SPC42YKL042W HPM1P40481 377 aa2.4□□□□□ -2.03
SPC42YKL042W YOR385WQ08909 290 aa2.4□□□□□ -2.03
SPC42YKL042W ATP14Q12349 124 aa2.4□□□□□ -2.03
SPC42YKL042W RIF1P29539 1916 aa2.4□□□□□ -2.03
SPC42YKL042W PRS3P38689 320 aaKnown RBP2.39□□□□□ -2.03
SPC42YKL042W FMP49A0A023PZB3 126 aa2.38□□□□□ -2.03
SPC42YKL042W TRS20P38334 175 aa2.38□□□□□ -2.03
SPC42YKL042W RPS20P38701 121 aaKnown RBP2.38□□□□□ -2.03
SPC42YKL042W YNL277W-AQ3E7Z0 62 aa2.38□□□□□ -2.03
SPC42YKL042W YGR017WP53210 297 aa2.37□□□□□ -2.03
SPC42YKL042W TIM8P57744 87 aa2.37□□□□□ -2.03
SPC42YKL042W ELC1Q03071 99 aa2.37□□□□□ -2.03
SPC42YKL042W TMA23Q03525 211 aa2.36□□□□□ -2.03
SPC42YKL042W RPS1AP33442 255 aaKnown RBP2.35□□□□□ -2.03
SPC42YKL042W ATG8P38182 117 aaRIP-Chip data2.35□□□□□ -2.03not detected
SPC42YKL042W YAR064WP39563 99 aa2.35□□□□□ -2.03
SPC42YKL042W HUA1P40325 198 aa2.35□□□□□ -2.03
SPC42YKL042W DYN2Q02647 92 aa2.35□□□□□ -2.03
SPC42YKL042W CNL1Q06333 122 aa2.35□□□□□ -2.03
SPC42YKL042W YCR050CP25630 102 aa2.34□□□□□ -2.03
SPC42YKL042W SED1Q01589 338 aa2.34□□□□□ -2.03
SPC42YKL042W MRPL44P19956 98 aa2.33□□□□□ -2.04
SPC42YKL042W HYM1P32464 399 aa2.33□□□□□ -2.04
SPC42YKL042W NAT5Q08689 176 aa2.33□□□□□ -2.04
SPC42YKL042W MHF1Q3E835 90 aa2.33□□□□□ -2.04
SPC42YKL042W RPL33AP05744 107 aaKnown RBP2.31□□□□□ -2.04
SPC42YKL042W QCR10P37299 77 aa2.31□□□□□ -2.04
SPC42YKL042W YAL064WP39711 94 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms