RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W NQM1P53228 333 aaPredicted RBP1.11□□□□□ -2.23
SEC28YIL076W SAY1P53324 424 aa1.11□□□□□ -2.23
SEC28YIL076W YKR005CQ02203 525 aa1.11□□□□□ -2.23
SEC28YIL076W SPC24Q04477 213 aa1.11□□□□□ -2.23
SEC28YIL076W GAL83Q04739 417 aa1.11□□□□□ -2.23
SEC28YIL076W SPC2Q04969 178 aa1.11□□□□□ -2.23
SEC28YIL076W FCY1Q12178 158 aa1.11□□□□□ -2.23
SEC28YIL076W PST2Q12335 198 aaKnown RBP1.11□□□□□ -2.23
SEC28YIL076W COX9P07255 59 aa1.1□□□□□ -2.23
SEC28YIL076W MATALPHA1P0CY06 175 aa1.1□□□□□ -2.23
SEC28YIL076W HMLALPHA1P0CY07 175 aa1.1□□□□□ -2.23
SEC28YIL076W ATG22P25568 528 aa1.1□□□□□ -2.23
SEC28YIL076W VMA6P32366 345 aaKnown RBP1.1□□□□□ -2.23
SEC28YIL076W TCA17P32613 152 aa1.1□□□□□ -2.23
SEC28YIL076W RIB7P33312 244 aa1.1□□□□□ -2.23
SEC28YIL076W RPS20P38701 121 aaKnown RBP1.1□□□□□ -2.23
SEC28YIL076W CCS1P40202 249 aaKnown RBP1.1□□□□□ -2.23
SEC28YIL076W FAR7P43592 221 aa1.1□□□□□ -2.23
SEC28YIL076W ERJ5P43613 295 aaPredicted RBP1.1□□□□□ -2.23
SEC28YIL076W BNA6P43619 295 aa1.1□□□□□ -2.23
SEC28YIL076W TMA22P47089 198 aaPredicted RBP1.1□□□□□ -2.23
SEC28YIL076W VPS55P47111 140 aa1.1□□□□□ -2.23
SEC28YIL076W COG5P53951 403 aa1.1□□□□□ -2.23
SEC28YIL076W YPL067CQ02754 198 aa1.1□□□□□ -2.23
SEC28YIL076W YMR099CQ03161 297 aaKnown RBP1.1□□□□□ -2.23
SEC28YIL076W YMR315WQ04869 349 aaKnown RBP1.1□□□□□ -2.23
SEC28YIL076W YMR226CQ05016 267 aaKnown RBP1.1□□□□□ -2.23
SEC28YIL076W HUT1Q12520 339 aa1.1□□□□□ -2.23
SEC28YIL076W ADF1Q2V2Q1 113 aa1.1□□□□□ -2.23
SEC28YIL076W RPL25P04456 142 aaKnown RBP1.09□□□□□ -2.23
SEC28YIL076W SNF4P12904 322 aa1.09□□□□□ -2.23
SEC28YIL076W STF2P16965 84 aa1.09□□□□□ -2.23
SEC28YIL076W UBC8P28263 218 aa1.09□□□□□ -2.23
SEC28YIL076W SNC2P33328 115 aa1.09□□□□□ -2.23
SEC28YIL076W YRA2P36036 203 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
SEC28YIL076W DLS1P40366 167 aa1.09□□□□□ -2.23
SEC28YIL076W MCM22P47167 239 aa1.09□□□□□ -2.23
SEC28YIL076W TTI2P47168 421 aa1.09□□□□□ -2.23
SEC28YIL076W NRK1P53915 240 aa1.09□□□□□ -2.23
SEC28YIL076W HSK3P69852 69 aa1.09□□□□□ -2.23
SEC28YIL076W YHP1Q04116 353 aa1.09□□□□□ -2.23
SEC28YIL076W LPP1Q04396 274 aa1.09□□□□□ -2.23
SEC28YIL076W UPS1Q05776 175 aa1.09□□□□□ -2.23
SEC28YIL076W PRM3Q08931 133 aa1.09□□□□□ -2.23
SEC28YIL076W KIN28P06242 306 aa1.08□□□□□ -2.24
SEC28YIL076W ADK1P07170 222 aaKnown RBP1.08□□□□□ -2.24
SEC28YIL076W AQY2P0CD90 149 aa1.08□□□□□ -2.24
SEC28YIL076W PHO85P17157 305 aa1.08□□□□□ -2.24
SEC28YIL076W YCR101CP25607 182 aa1.08□□□□□ -2.24
SEC28YIL076W SFK1P35735 353 aa1.08□□□□□ -2.24
SEC28YIL076W ECM4P36156 370 aa1.08□□□□□ -2.24
SEC28YIL076W PAU24P38155 120 aa1.08□□□□□ -2.24
SEC28YIL076W UMP1P38293 148 aa1.08□□□□□ -2.24
SEC28YIL076W YBR285WP38354 144 aa1.08□□□□□ -2.24
SEC28YIL076W DOG2P38773 246 aa1.08□□□□□ -2.24
SEC28YIL076W PAU12P53343 120 aa1.08□□□□□ -2.24
SEC28YIL076W GRX5Q02784 150 aa1.08□□□□□ -2.24
SEC28YIL076W YMR252CQ04814 134 aa1.08□□□□□ -2.24
SEC28YIL076W HOR7Q05827 59 aa1.08□□□□□ -2.24
SEC28YIL076W NMA1Q06178 401 aaKnown RBP1.08□□□□□ -2.24
SEC28YIL076W YLR173WQ06247 608 aa1.08□□□□□ -2.24
SEC28YIL076W YOL118CQ08259 102 aa1.08□□□□□ -2.24
SEC28YIL076W YOR192C-CQ3E736 78 aa1.08□□□□□ -2.24
SEC28YIL076W YNL146C-AQ3E7Z1 64 aa1.08□□□□□ -2.24
SEC28YIL076W QCR7P00128 127 aa1.07□□□□□ -2.24
SEC28YIL076W YLR156WP0CE96 114 aa1.07□□□□□ -2.24
SEC28YIL076W YLR159WP0CE97 114 aa1.07□□□□□ -2.24
SEC28YIL076W YLR161WP0CE98 114 aa1.07□□□□□ -2.24
SEC28YIL076W BUD23P25627 275 aaPredicted RBP1.07□□□□□ -2.24
SEC28YIL076W ARO7P32178 256 aa1.07□□□□□ -2.24
SEC28YIL076W RPB7P34087 171 aa1.07□□□□□ -2.24
SEC28YIL076W MPC2P38857 129 aa1.07□□□□□ -2.24
SEC28YIL076W YNL194CP40169 301 aa1.07□□□□□ -2.24
SEC28YIL076W PAM16P42949 149 aa1.07□□□□□ -2.24
SEC28YIL076W YFR035CP43608 114 aa1.07□□□□□ -2.24
SEC28YIL076W DIE2P50076 525 aa1.07□□□□□ -2.24
SEC28YIL076W POP3P53833 195 aaPredicted RBP1.07□□□□□ -2.24
SEC28YIL076W DID2P69771 204 aa1.07□□□□□ -2.24
SEC28YIL076W YDR274CP87283 123 aa1.07□□□□□ -2.24
SEC28YIL076W SNZ1Q03148 297 aa1.07□□□□□ -2.24
SEC28YIL076W FIT1Q04433 528 aa1.07□□□□□ -2.24
SEC28YIL076W NOC4Q06512 552 aaPredicted RBP1.07□□□□□ -2.24
SEC28YIL076W PAM18Q07914 168 aa1.07□□□□□ -2.24
SEC28YIL076W DGK1Q12382 290 aa1.07□□□□□ -2.24
SEC28YIL076W YER188C-AP0C0V2 99 aa1.06□□□□□ -2.24
SEC28YIL076W YGL041W-AP0C5N3 154 aa1.06□□□□□ -2.24
SEC28YIL076W MRS4P23500 304 aa1.06□□□□□ -2.24
SEC28YIL076W OCH1P31755 480 aa1.06□□□□□ -2.24
SEC28YIL076W PAU2P32612 120 aa1.06□□□□□ -2.24
SEC28YIL076W YUH1P35127 236 aa1.06□□□□□ -2.24
SEC28YIL076W UTP30P36144 274 aaKnown RBP1.06□□□□□ -2.24
SEC28YIL076W MIC12P38341 106 aa1.06□□□□□ -2.24
SEC28YIL076W YEL067CP39978 195 aa1.06□□□□□ -2.24
SEC28YIL076W MRPL50P53724 139 aa1.06□□□□□ -2.24
SEC28YIL076W RRP17Q04031 235 aaPredicted RBP1.06□□□□□ -2.24
SEC28YIL076W YLR283WQ05867 314 aa1.06□□□□□ -2.24
SEC28YIL076W YPD1Q07688 167 aa1.06□□□□□ -2.24
SEC28YIL076W YPR013CQ12145 317 aa1.06□□□□□ -2.24
SEC28YIL076W ATG31Q12421 196 aa1.06□□□□□ -2.24
SEC28YIL076W YPR108W-AQ3E7B3 70 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms