RNA–Protein interactions for RNA: YIL009W

FAA3, Transcript of Long chain fatty acyl-CoA synthetase, yeast

Gene FAA3, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAA3	YIL009W	NRG2	P38082	220 aa		4	□□□□□ -1.77
FAA3	YIL009W	SHE1	P38200	338 aa		4	□□□□□ -1.77
FAA3	YIL009W	PHS1	P40857	217 aa		4	□□□□□ -1.77
FAA3	YIL009W	UBC13	P52490	153 aa		4	□□□□□ -1.77
FAA3	YIL009W	YML079W	Q03629	201 aa		4	□□□□□ -1.77
FAA3	YIL009W	NMA1	Q06178	401 aa	Known RBP	4	□□□□□ -1.77
FAA3	YIL009W	JID1	Q12350	301 aa		4	□□□□□ -1.77
FAA3	YIL009W	MID2	P36027	376 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	GCV3	P39726	170 aa	Predicted RBP	3.99	□□□□□ -1.77
FAA3	YIL009W	YIL169C	P40442	995 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	EAF6	P47128	113 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	SDS23	P53172	527 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	YCR099C	P25657	155 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	PHO88	P38264	188 aa	Predicted RBP	3.99	□□□□□ -1.77
FAA3	YIL009W	CTF8	P38877	133 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	GAT4	P40569	121 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	YNL234W	P53857	426 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	PET191	Q02772	108 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	YLR012C	Q07927	99 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	YOL160W	Q08321	113 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	YIL102C-A	Q2V2P5	75 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	YER175W-A	Q8TGU4	54 aa		3.99	□□□□□ -1.77
FAA3	YIL009W	MRS4	P23500	304 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	YCR050C	P25630	102 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	YHL018W	P38744	120 aa	Predicted RBP	3.98	□□□□□ -1.77
FAA3	YIL009W	SVP26	P38869	228 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	MPM1	P40364	252 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	EMC5	P40540	141 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	UBP8	P50102	471 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	YNL046W	P53956	172 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	HRT1	Q08273	121 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	YDL157C	Q12082	118 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	YLR363W-A	Q3E747	85 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	YOL162W	P0CF19	215 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	SPO73	P40031	143 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	YGL088W	P53151	121 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	SWS2	P53937	143 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	YMR187C	Q03236	431 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	IRC25	Q07951	179 aa		3.98	□□□□□ -1.77
FAA3	YIL009W	YAL064W-B	O13512	126 aa		3.97	□□□□□ -1.77
FAA3	YIL009W	Q0255	P03881	472 aa		3.97	□□□□□ -1.77
FAA3	YIL009W	TOM6	P33448	61 aa		3.97	□□□□□ -1.77
FAA3	YIL009W	JJJ3	P47138	172 aa		3.97	□□□□□ -1.77
FAA3	YIL009W	DSK2	P48510	373 aa		3.97	□□□□□ -1.77
FAA3	YIL009W	RSM19	P53733	91 aa	Predicted RBP	3.97	□□□□□ -1.77
FAA3	YIL009W	GRX5	Q02784	150 aa		3.97	□□□□□ -1.77
FAA3	YIL009W	EST3	Q03096	181 aa		3.97	□□□□□ -1.77
FAA3	YIL009W	YMR252C	Q04814	134 aa		3.97	□□□□□ -1.77
FAA3	YIL009W	ATG40	Q99325	256 aa		3.97	□□□□□ -1.77
FAA3	YIL009W	UBC4	P15731	148 aa		3.96	□□□□□ -1.77
FAA3	YIL009W	PEX2	P32800	271 aa		3.96	□□□□□ -1.77
FAA3	YIL009W	CSH1	P38287	376 aa		3.96	□□□□□ -1.77
FAA3	YIL009W	ASP1	P38986	381 aa	Predicted RBP	3.96	□□□□□ -1.77
FAA3	YIL009W	YER134C	P40081	178 aa		3.96	□□□□□ -1.77
FAA3	YIL009W	YGL193C	P53097	103 aa		3.96	□□□□□ -1.77
FAA3	YIL009W	YDL057W	Q07379	328 aa		3.96	□□□□□ -1.77
FAA3	YIL009W	GAT3	Q07928	141 aa		3.96	□□□□□ -1.77
FAA3	YIL009W	MSB2	P32334	1306 aa		3.96	□□□□□ -1.78
FAA3	YIL009W	PAU16	P35994	123 aa		3.96	□□□□□ -1.78
FAA3	YIL009W	SMP1	P38128	452 aa		3.96	□□□□□ -1.78
FAA3	YIL009W	YBL081W	P38180	368 aa	Known RBP	3.96	□□□□□ -1.78
FAA3	YIL009W	NSA2	P40078	261 aa	Known RBP	3.96	□□□□□ -1.78
FAA3	YIL009W	DFG10	P40526	253 aa		3.96	□□□□□ -1.78
FAA3	YIL009W	NCE103	P53615	221 aa		3.96	□□□□□ -1.78
FAA3	YIL009W	YLR281C	Q05863	155 aa		3.96	□□□□□ -1.78
FAA3	YIL009W	TAD3	Q9URQ3	322 aa		3.96	□□□□□ -1.78
FAA3	YIL009W	RIM15	P43565	1770 aa		3.95	□□□□□ -1.78
FAA3	YIL009W	RPB7	P34087	171 aa		3.95	□□□□□ -1.78
FAA3	YIL009W	ECM34	P38728	170 aa		3.95	□□□□□ -1.78
FAA3	YIL009W	YNL195C	P40168	261 aa		3.95	□□□□□ -1.78
FAA3	YIL009W	TOS2	P50078	622 aa		3.95	□□□□□ -1.78
FAA3	YIL009W	SPG1	P50088	95 aa		3.95	□□□□□ -1.78
FAA3	YIL009W	KNH1	P50112	268 aa		3.95	□□□□□ -1.78
FAA3	YIL009W	NCE102	Q12207	173 aa	RIP-Chip data	3.95	□□□□□ -1.78	not detected
FAA3	YIL009W	POC4	Q12245	148 aa	Predicted RBP	3.95	□□□□□ -1.78
FAA3	YIL009W	MRPS9	P38120	278 aa		3.94	□□□□□ -1.78
FAA3	YIL009W	GPI18	P38211	433 aa		3.94	□□□□□ -1.78
FAA3	YIL009W	GGC1	P38988	300 aa		3.94	□□□□□ -1.78
FAA3	YIL009W	POP3	P53833	195 aa	Predicted RBP	3.94	□□□□□ -1.78
FAA3	YIL009W	YDR119W-A	Q2V2P9	66 aa		3.94	□□□□□ -1.78
FAA3	YIL009W	YHR214C-E	Q8TGK0	99 aa		3.94	□□□□□ -1.78
FAA3	YIL009W	HSP12	P22943	109 aa	Known RBP	3.94	□□□□□ -1.78
FAA3	YIL009W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.94	□□□□□ -1.78	not detected
FAA3	YIL009W	FYV4	P38783	130 aa	Predicted RBP	3.94	□□□□□ -1.78
FAA3	YIL009W	PAU5	P43575	122 aa		3.94	□□□□□ -1.78
FAA3	YIL009W	TDA7	P53882	636 aa	Predicted RBP	3.94	□□□□□ -1.78
FAA3	YIL009W	SMD1	Q02260	146 aa	Predicted RBP	3.94	□□□□□ -1.78
FAA3	YIL009W	GPI19	Q04082	140 aa		3.94	□□□□□ -1.78
FAA3	YIL009W	DAD1	Q12248	94 aa		3.94	□□□□□ -1.78
FAA3	YIL009W	YFL041W-A	Q3E817	63 aa		3.94	□□□□□ -1.78
FAA3	YIL009W	YGR018C	P53211	109 aa		3.93	□□□□□ -1.78
FAA3	YIL009W	YGR050C	P53231	118 aa		3.93	□□□□□ -1.78
FAA3	YIL009W	MIX14	Q04341	121 aa		3.93	□□□□□ -1.78
FAA3	YIL009W	YDL211C	Q12121	372 aa		3.93	□□□□□ -1.78
FAA3	YIL009W	RPL40A	P0CH08	128 aa	Known RBP	3.93	□□□□□ -1.78
FAA3	YIL009W	RPL40B	P0CH09	128 aa	Known RBP	3.93	□□□□□ -1.78
FAA3	YIL009W	FUN19	P28003	413 aa	Predicted RBP	3.93	□□□□□ -1.78
FAA3	YIL009W	NHP2	P32495	156 aa	Predicted RBP	3.93	□□□□□ -1.78
FAA3	YIL009W	TIM17	P39515	158 aa		3.93	□□□□□ -1.78
FAA3	YIL009W	FHN1	P53279	174 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms