RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W YRF1-7P0CX15 1859 aa0.05□□□□□ -2.4
VMA21YGR105W TY4B-JP47024 1803 aa0.04□□□□□ -2.4
VMA21YGR105W GSC2P40989 1895 aa0.04□□□□□ -2.4
VMA21YGR105W RPL33AP05744 107 aaKnown RBP0.04□□□□□ -2.4
VMA21YGR105W PHO13P19881 312 aa0.04□□□□□ -2.4
VMA21YGR105W RAD51P25454 400 aa0.04□□□□□ -2.4
VMA21YGR105W PEX34P25584 144 aa0.04□□□□□ -2.4
VMA21YGR105W SRP14P38985 146 aa0.04□□□□□ -2.4
VMA21YGR105W SEC72P39742 193 aaKnown RBP0.04□□□□□ -2.4
VMA21YGR105W MVB12P42939 101 aa0.04□□□□□ -2.4
VMA21YGR105W GPI2P46961 280 aa0.04□□□□□ -2.4
VMA21YGR105W YIP3P53633 176 aa0.04□□□□□ -2.4
VMA21YGR105W EST3Q03096 181 aa0.04□□□□□ -2.4
VMA21YGR105W YDR476CQ03362 224 aa0.04□□□□□ -2.4
VMA21YGR105W YDR102CQ03864 110 aa0.04□□□□□ -2.4
VMA21YGR105W YPD1Q07688 167 aa0.04□□□□□ -2.4
VMA21YGR105W RRT7Q07829 113 aa0.04□□□□□ -2.4
VMA21YGR105W HUT1Q12520 339 aa0.04□□□□□ -2.4
VMA21YGR105W RIB3Q99258 208 aa0.04□□□□□ -2.4
VMA21YGR105W UBR1P19812 1950 aa0.04□□□□□ -2.4
VMA21YGR105W YBR056W-AI2HB52 66 aa0.03□□□□□ -2.4
VMA21YGR105W ATP5P09457 212 aa0.03□□□□□ -2.4
VMA21YGR105W NHP6AP11632 93 aaKnown RBP0.03□□□□□ -2.4
VMA21YGR105W FUN14P18411 198 aa0.03□□□□□ -2.4
VMA21YGR105W VPS51P36116 164 aa0.03□□□□□ -2.4
VMA21YGR105W FES1P38260 290 aa0.03□□□□□ -2.4
VMA21YGR105W IPI1P38803 334 aaPredicted RBP0.03□□□□□ -2.4
VMA21YGR105W EGD2P38879 174 aaKnown RBP0.03□□□□□ -2.4
VMA21YGR105W DLS1P40366 167 aa0.03□□□□□ -2.4
VMA21YGR105W RPS29BP41058 56 aaKnown RBP0.03□□□□□ -2.4
VMA21YGR105W RCF2P53721 224 aa0.03□□□□□ -2.4
VMA21YGR105W GIM3P53900 129 aa0.03□□□□□ -2.4
VMA21YGR105W HSK3P69852 69 aa0.03□□□□□ -2.4
VMA21YGR105W MAK3Q03503 176 aa0.03□□□□□ -2.4
VMA21YGR105W YPR153WQ06537 140 aa0.03□□□□□ -2.4
VMA21YGR105W GPI11Q06636 219 aa0.03□□□□□ -2.4
VMA21YGR105W IRC19Q07843 230 aa0.03□□□□□ -2.4
VMA21YGR105W YLR046CQ12253 270 aa0.03□□□□□ -2.4
VMA21YGR105W YOR034C-AQ3E735 80 aa0.03□□□□□ -2.4
VMA21YGR105W MHF1Q3E835 90 aa0.03□□□□□ -2.4
VMA21YGR105W HUG1Q6Q5K6 68 aa0.03□□□□□ -2.4
VMA21YGR105W BLM10P43583 2143 aa0.02□□□□□ -2.41
VMA21YGR105W TY1B-HO13535 1793 aa0.02□□□□□ -2.41
VMA21YGR105W YGL014C-AP0C5N1 53 aa0.02□□□□□ -2.41
VMA21YGR105W PBI2P0CT04 75 aaKnown RBP0.02□□□□□ -2.41
VMA21YGR105W ANB1P19211 157 aa0.02□□□□□ -2.41
VMA21YGR105W SRP21P32342 167 aa0.02□□□□□ -2.41
VMA21YGR105W SLM6P38343 150 aa0.02□□□□□ -2.41
VMA21YGR105W YGL193CP53097 103 aa0.02□□□□□ -2.41
VMA21YGR105W YGL101WP53144 215 aa0.02□□□□□ -2.41
VMA21YGR105W YNL019CP53975 284 aa0.02□□□□□ -2.41
VMA21YGR105W LSM3P57743 89 aaKnown RBP0.02□□□□□ -2.41
VMA21YGR105W GRX3Q03835 250 aa0.02□□□□□ -2.41
VMA21YGR105W YMR122CQ03879 124 aa0.02□□□□□ -2.41
VMA21YGR105W RFU1Q08003 200 aa0.02□□□□□ -2.41
VMA21YGR105W FIT3Q08907 204 aa0.02□□□□□ -2.41
VMA21YGR105W YLR053CQ12026 108 aa0.02□□□□□ -2.41
VMA21YGR105W SCS22Q6Q595 175 aa0.02□□□□□ -2.41
VMA21YGR105W MED11Q99278 115 aa0.02□□□□□ -2.41
VMA21YGR105W BNI1P41832 1953 aa0.02□□□□□ -2.41
VMA21YGR105W SAC3P46674 1301 aa0.02□□□□□ -2.41
VMA21YGR105W PFY1P07274 126 aa0.01□□□□□ -2.41
VMA21YGR105W UBI4P0CG63 381 aaKnown RBP0.01□□□□□ -2.41
VMA21YGR105W RPL30P14120 105 aaKnown RBP0.01□□□□□ -2.41
VMA21YGR105W MRS4P23500 304 aa0.01□□□□□ -2.41
VMA21YGR105W APQ12P40532 138 aa0.01□□□□□ -2.41
VMA21YGR105W LST8P41318 303 aa0.01□□□□□ -2.41
VMA21YGR105W DIE2P50076 525 aa0.01□□□□□ -2.41
VMA21YGR105W EMC4P53073 190 aa0.01□□□□□ -2.41
VMA21YGR105W COA4Q05809 96 aa0.01□□□□□ -2.41
VMA21YGR105W NAT5Q08689 176 aa0.01□□□□□ -2.41
VMA21YGR105W RDI1Q12434 202 aa0.01□□□□□ -2.41
VMA21YGR105W SNF2P22082 1703 aa0.01□□□□□ -2.41
VMA21YGR105W QCR2P07257 368 aa0□□□□□ -2.41
VMA21YGR105W YHR213WP0CI67 198 aa0□□□□□ -2.41
VMA21YGR105W MRPL31P14063 131 aaPredicted RBP0□□□□□ -2.41
VMA21YGR105W NMT1P14743 455 aa0□□□□□ -2.41
VMA21YGR105W MRPL44P19956 98 aa0□□□□□ -2.41
VMA21YGR105W BUB2P26448 306 aaPredicted RBP0□□□□□ -2.41
VMA21YGR105W MRPL24P36525 258 aaPredicted RBP0□□□□□ -2.41
VMA21YGR105W YER121WP40076 114 aa0□□□□□ -2.41
VMA21YGR105W YER181CP40097 107 aa0□□□□□ -2.41
VMA21YGR105W POR2P40478 281 aa0□□□□□ -2.41
VMA21YGR105W FIP1P45976 327 aa0□□□□□ -2.41
VMA21YGR105W ORM1P53224 222 aa0□□□□□ -2.41
VMA21YGR105W RAF1Q06891 181 aa0□□□□□ -2.41
VMA21YGR105W LDB18Q07887 179 aa0□□□□□ -2.41
VMA21YGR105W ATP14Q12349 124 aa0□□□□□ -2.41
VMA21YGR105W YRF1-6P53819 1859 aa-0.01□□□□□ -2.41
VMA21YGR105W RPL35AP0CX84 120 aaKnown RBP-0.01□□□□□ -2.41
VMA21YGR105W RPL35BP0CX85 120 aaKnown RBP-0.01□□□□□ -2.41
VMA21YGR105W DDR48P18899 430 aaKnown RBP-0.01□□□□□ -2.41
VMA21YGR105W RPS1BP23248 255 aaKnown RBP-0.01□□□□□ -2.41
VMA21YGR105W FYV5P25585 152 aa-0.01□□□□□ -2.41
VMA21YGR105W UTP11P34247 250 aaPredicted RBP-0.01□□□□□ -2.41
VMA21YGR105W MRPL11P36521 249 aaPredicted RBP-0.01□□□□□ -2.41
VMA21YGR105W SFT2P38166 215 aa-0.01□□□□□ -2.41
VMA21YGR105W YBR013CP38215 129 aa-0.01□□□□□ -2.41
VMA21YGR105W LSM8P47093 109 aaKnown RBP-0.01□□□□□ -2.41
VMA21YGR105W SPG1P50088 95 aa-0.01□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 78.8 ms