RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B YDR366CP87287 132 aa2.21□□□□□ -2.06
YGR038C-BYGR038C-B RDL1Q12305 139 aaKnown RBP2.21□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-DR1Q03855 1755 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B FYV5P25585 152 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B AIM29P36154 155 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B TRS20P38334 175 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B YHR130CP38834 111 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B SMD3P43321 101 aaKnown RBP2.2□□□□□ -2.06
YGR038C-BYGR038C-B ATG33Q06485 197 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B TPT1Q12272 230 aaKnown RBP2.2□□□□□ -2.06
YGR038C-BYGR038C-B YEL009C-AA0A023PZF2 135 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B LHP1P33399 275 aaKnown RBP2.2□□□□□ -2.06
YGR038C-BYGR038C-B RIB1P38066 345 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B HTD2P38790 280 aaKnown RBP2.2□□□□□ -2.06
YGR038C-BYGR038C-B DIE2P50076 525 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B YGL118CP53132 145 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B FSF1Q12029 327 aaKnown RBP2.2□□□□□ -2.06
YGR038C-BYGR038C-B BOL1Q3E793 110 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B REC114P32841 428 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B PPQ1P32945 549 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B SFT1P43682 97 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B CWC25P53854 179 aaKnown RBP2.2□□□□□ -2.06
YGR038C-BYGR038C-B SWT21P53873 357 aaPredicted RBP2.2□□□□□ -2.06
YGR038C-BYGR038C-B SFH1Q06168 426 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B YAL063C-AQ3E791 96 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B YDR034C-AP0C289 58 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B MATALPHA1P0CY06 175 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B HMLALPHA1P0CY07 175 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B LDS1P31379 325 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B CPR5P35176 225 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B MRX11Q03079 207 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B MRPS8Q03799 155 aa2.2□□□□□ -2.06
YGR038C-BYGR038C-B ARC18Q05933 178 aaKnown RBP2.2□□□□□ -2.06
YGR038C-BYGR038C-B RPL31AP0C2H8 113 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B YER181CP40097 107 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B UBP8P50102 471 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TIM18Q08749 192 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-HO13535 1793 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-DR5P0C2I2 1755 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-DR6P0C2I3 1755 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-LR2P0C2I5 1755 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-LR3P0C2I6 1755 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-PR1P0C2I9 1755 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-PR2P0C2J0 1756 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-PR3P0C2J1 1755 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-JR1P47098 1755 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-ML2Q03434 1755 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-ER1Q03612 1755 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-ML1Q04711 1755 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-GR2Q12269 1755 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-OLQ12273 1755 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-PLQ12414 1755 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B YCR007CP25354 239 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B MRPL28P36527 147 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B ATP6P00854 259 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B CDC50P25656 391 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B SHB17P36136 271 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B YMR141CP40211 102 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B GPI2P46961 280 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B TOM7P53507 60 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B DAD4P69851 72 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B RNH202Q05635 350 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B PAU23Q07987 124 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B YMR030W-AQ3E760 96 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B CHO1P08456 276 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B YBL039W-BP0C268 59 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B RPL27AP0C2H6 136 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B SPO13P23624 291 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B FLO10P36170 1169 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B MBB1P39534 108 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B CDH1P53197 566 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B SOK2P53438 785 aaPredicted RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B TY1A-DR2Q03964 440 aaKnown RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B MRPL35Q06678 367 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B COX5BP00425 151 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B KRE1P17260 313 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B FPR2P32472 135 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B FMT1P32785 401 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B ZRT1P32804 376 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B MBA1P38300 278 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B OXA1P39952 402 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B YIA6P40556 373 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B EMC6Q12431 108 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B MRPL23Q12487 163 aaPredicted RBP2.19□□□□□ -2.06
YGR038C-BYGR038C-B COA6Q3E846 104 aa2.19□□□□□ -2.06
YGR038C-BYGR038C-B RPS31P05759 152 aaKnown RBP2.18□□□□□ -2.06
YGR038C-BYGR038C-B YER084WP40057 128 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B PAM16P42949 149 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B TAD2P47058 250 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B PHO23P50947 330 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B YNL194CP40169 301 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B SAE3P89114 91 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B SEC4P07560 215 aaKnown RBP2.18□□□□□ -2.06
YGR038C-BYGR038C-B RPL12AP0CX53 165 aaKnown RBP2.18□□□□□ -2.06
YGR038C-BYGR038C-B RPL12BP0CX54 165 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B GAR1P28007 205 aaKnown RBP2.18□□□□□ -2.06
YGR038C-BYGR038C-B YNK1P36010 153 aaKnown RBP2.18□□□□□ -2.06
YGR038C-BYGR038C-B SPC25P40014 221 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B COX10P21592 462 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B RPL32P38061 130 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms