RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	YPL229W	Q99395	206 aa		4.58	□□□□□ -1.68
VTC2	YFL004W	TOR1	P35169	2470 aa		4.58	□□□□□ -1.68
VTC2	YFL004W	RPL23A	P0CX41	137 aa	Known RBP	4.57	□□□□□ -1.68
VTC2	YFL004W	RPL23B	P0CX42	137 aa	Known RBP	4.57	□□□□□ -1.68
VTC2	YFL004W	VEL1	P53058	206 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	YGR045C	P53229	120 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	YLR460C	P54007	376 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	NUP53	Q03790	475 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	RPC11	Q04307	110 aa	Predicted RBP	4.57	□□□□□ -1.68
VTC2	YFL004W	YLR302C	O13544	120 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	YKL044W	P36092	106 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	YHR180W	P38868	163 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	YER121W	P40076	114 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	ATF1	P40353	525 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	AQR1	P53943	586 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	NCE101	Q02820	53 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	DIC1	Q06143	298 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	GEP3	Q08622	556 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	YDL180W	Q12301	547 aa		4.57	□□□□□ -1.68
VTC2	YFL004W	RPL11A	P0C0W9	174 aa	Known RBP	4.56	□□□□□ -1.68
VTC2	YFL004W	PCL1	P24867	279 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	RPS2	P25443	254 aa	Known RBP	4.56	□□□□□ -1.68
VTC2	YFL004W	OXA1	P39952	402 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	WSC2	P53832	503 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	RPL11B	Q3E757	174 aa	Predicted RBP	4.56	□□□□□ -1.68
VTC2	YFL004W	YBL112C	Q3E7Y4	105 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	YFR054C	P43622	192 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	YJL118W	P47022	219 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	YIP3	P53633	176 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	ATP19	P81451	68 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	VPS68	Q12016	184 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	POM34	Q12445	299 aa		4.56	□□□□□ -1.68
VTC2	YFL004W	CUP1-1	P0CX80	61 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	CUP1-2	P0CX81	61 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	KRE1	P17260	313 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	SBH2	P52871	88 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	NCE103	P53615	221 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	ECM18	Q04623	453 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	YDL218W	Q07629	317 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	GRE1	Q08969	168 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	MRPL20	P22354	195 aa	Predicted RBP	4.55	□□□□□ -1.68
VTC2	YFL004W	SPC29	P33419	253 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	YPI1	P43587	155 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	YOL118C	Q08259	102 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	YOR186W	Q08560	144 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	TIM18	Q08749	192 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	YDR215C	Q12240	137 aa		4.55	□□□□□ -1.68
VTC2	YFL004W	REC104	P33323	182 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	YKR041W	P36134	250 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	SWD3	P38123	315 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	YNR048W	P53740	393 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	YFH1	Q07540	174 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	YOR292C	Q08743	309 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	HTL1	Q9URQ5	78 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	IMG2	P25642	146 aa	Predicted RBP	4.54	□□□□□ -1.68
VTC2	YFL004W	APS1	P35181	156 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	MIC12	P38341	106 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	CCS1	P40202	249 aa	Known RBP	4.54	□□□□□ -1.68
VTC2	YFL004W	GZF3	P42944	551 aa	Known RBP	4.54	□□□□□ -1.68
VTC2	YFL004W	FHN1	P53279	174 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	HPA2	Q06592	156 aa		4.54	□□□□□ -1.68
VTC2	YFL004W	DFM1	Q12743	341 aa	Known RBP	4.54	□□□□□ -1.68
VTC2	YFL004W	YMR316C-A	I2HB70	103 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	SFT2	P38166	215 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	YER076C	P40049	302 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	EGT2	P42835	1041 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	BNA1	P47096	177 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	YDL186W	P48568	277 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	YIL014C-A	Q02598	104 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	MRX11	Q03079	207 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	YTH1	Q06102	208 aa	Predicted RBP	4.53	□□□□□ -1.68
VTC2	YFL004W	CYC3	P06182	269 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	RPL30	P14120	105 aa	Known RBP	4.53	□□□□□ -1.68
VTC2	YFL004W	MDM10	P18409	493 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	UBS1	P38290	277 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	YER181C	P40097	107 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	IRC19	Q07843	230 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	IRC25	Q07951	179 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	MSA1	Q08471	629 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	YOR192C-C	Q3E736	78 aa		4.53	□□□□□ -1.68
VTC2	YFL004W	YHR173C	P38864	112 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	YPL073C	P40323	161 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	YGR039W	P53225	103 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	RAV2	Q03956	351 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	ATG33	Q06485	197 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	MDM35	O60200	86 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	PCL2	P25693	308 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	RPA12	P32529	125 aa	Known RBP	4.52	□□□□□ -1.69
VTC2	YFL004W	YIL089W	P40500	205 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	HPF1	Q05164	967 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	YPS3	Q12303	508 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	MPD1	Q12404	318 aa	Known RBP	4.52	□□□□□ -1.69
VTC2	YFL004W	YAL063C-A	Q3E791	96 aa		4.52	□□□□□ -1.69
VTC2	YFL004W	YLR415C	O13578	112 aa		4.51	□□□□□ -1.69
VTC2	YFL004W	RAD6	P06104	172 aa		4.51	□□□□□ -1.69
VTC2	YFL004W	MRPL31	P14063	131 aa	Predicted RBP	4.51	□□□□□ -1.69
VTC2	YFL004W	PHO85	P17157	305 aa		4.51	□□□□□ -1.69
VTC2	YFL004W	FZF1	P32805	299 aa		4.51	□□□□□ -1.69
VTC2	YFL004W	CSH1	P38287	376 aa		4.51	□□□□□ -1.69
VTC2	YFL004W	SUN4	P53616	420 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms