RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	RAD28	Q12021	506 aa		5.57	□□□□□ -1.52
URH1	YDR400W	POC4	Q12245	148 aa	Predicted RBP	5.57	□□□□□ -1.52
URH1	YDR400W	SME1	Q12330	94 aa	Predicted RBP	5.57	□□□□□ -1.52
URH1	YDR400W	TRA1	P38811	3744 aa		5.56	□□□□□ -1.52
URH1	YDR400W	RPL9A	P05738	191 aa	Known RBP	5.56	□□□□□ -1.52
URH1	YDR400W	DAL80	P26343	269 aa		5.56	□□□□□ -1.52
URH1	YDR400W	YGP1	P38616	354 aa	Known RBP	5.56	□□□□□ -1.52
URH1	YDR400W	LOC1	P43586	204 aa	Predicted RBP	5.56	□□□□□ -1.52
URH1	YDR400W	CRH1	P53301	507 aa		5.56	□□□□□ -1.52
URH1	YDR400W	YNL046W	P53956	172 aa		5.56	□□□□□ -1.52
URH1	YDR400W	RAX2	Q12465	1220 aa		5.56	□□□□□ -1.52
URH1	YDR400W	YOS1	Q3E834	85 aa		5.56	□□□□□ -1.52
URH1	YDR400W	ALK2	P32789	676 aa	Predicted RBP	5.55	□□□□□ -1.52
URH1	YDR400W	CTR2	P38865	189 aa		5.55	□□□□□ -1.52
URH1	YDR400W	YFR057W	P43625	151 aa		5.55	□□□□□ -1.52
URH1	YDR400W	DYN2	Q02647	92 aa		5.55	□□□□□ -1.52
URH1	YDR400W	YMR007W	Q03675	126 aa		5.55	□□□□□ -1.52
URH1	YDR400W	CDC7	P06243	507 aa		5.54	□□□□□ -1.52
URH1	YDR400W	FPR2	P32472	135 aa		5.54	□□□□□ -1.52
URH1	YDR400W	NSA2	P40078	261 aa	Known RBP	5.54	□□□□□ -1.52
URH1	YDR400W	RPL9B	P51401	191 aa	Known RBP	5.54	□□□□□ -1.52
URH1	YDR400W	JID1	Q12350	301 aa		5.54	□□□□□ -1.52
URH1	YDR400W	PET494	P07390	489 aa	Predicted RBP	5.53	□□□□□ -1.52
URH1	YDR400W	NHP6A	P11632	93 aa	Known RBP	5.53	□□□□□ -1.52
URH1	YDR400W	NOP1	P15646	327 aa	Known RBP	5.53	□□□□□ -1.52
URH1	YDR400W	TOM40	P23644	387 aa	Known RBP	5.53	□□□□□ -1.52
URH1	YDR400W	HMX1	P32339	317 aa		5.53	□□□□□ -1.52
URH1	YDR400W	ACP1	P32463	125 aa		5.53	□□□□□ -1.52
URH1	YDR400W	RTC3	P38804	111 aa	Predicted RBP	5.53	□□□□□ -1.52
URH1	YDR400W	YJR015W	P47090	510 aa		5.53	□□□□□ -1.52
URH1	YDR400W	YGL114W	P53134	725 aa		5.53	□□□□□ -1.52
URH1	YDR400W	LST7	P53237	242 aa		5.53	□□□□□ -1.52
URH1	YDR400W	FYV6	P53913	173 aa		5.53	□□□□□ -1.52
URH1	YDR400W	CMC2	Q3E7A4	109 aa		5.53	□□□□□ -1.52
URH1	YDR400W	YEL045C	P32616	141 aa		5.52	□□□□□ -1.53
URH1	YDR400W	ECM14	P38836	430 aa		5.52	□□□□□ -1.53
URH1	YDR400W	YAR068W	P39564	161 aa		5.52	□□□□□ -1.53
URH1	YDR400W	SHH3	Q04487	196 aa		5.52	□□□□□ -1.53
URH1	YDR400W	TEL1	P38110	2787 aa		5.51	□□□□□ -1.53
URH1	YDR400W	RPS22A	P0C0W1	130 aa	Known RBP	5.51	□□□□□ -1.53
URH1	YDR400W	PAU19	P0CE85	124 aa		5.51	□□□□□ -1.53
URH1	YDR400W	PAU21	P0CE86	164 aa		5.51	□□□□□ -1.53
URH1	YDR400W	PAU22	P0CE87	164 aa		5.51	□□□□□ -1.53
URH1	YDR400W	PAU3	P25610	124 aa		5.51	□□□□□ -1.53
URH1	YDR400W	YKR045C	P36138	183 aa		5.51	□□□□□ -1.53
URH1	YDR400W	DER1	P38307	211 aa		5.51	□□□□□ -1.53
URH1	YDR400W	HSP10	P38910	106 aa		5.51	□□□□□ -1.53
URH1	YDR400W	MIC27	P50945	234 aa		5.51	□□□□□ -1.53
URH1	YDR400W	YMR316C-A	I2HB70	103 aa		5.5	□□□□□ -1.53
URH1	YDR400W	SOD1	P00445	154 aa	Known RBP	5.5	□□□□□ -1.53
URH1	YDR400W	RNA15	P25299	296 aa	Predicted RBP	5.5	□□□□□ -1.53
URH1	YDR400W	SRP21	P32342	167 aa		5.5	□□□□□ -1.53
URH1	YDR400W	RPS0A	P32905	252 aa	Known RBP	5.5	□□□□□ -1.53
URH1	YDR400W	YKL187C	P34231	750 aa		5.5	□□□□□ -1.53
URH1	YDR400W	CSH1	P38287	376 aa		5.5	□□□□□ -1.53
URH1	YDR400W	SUR2	P38992	349 aa		5.5	□□□□□ -1.53
URH1	YDR400W	PAU5	P43575	122 aa		5.5	□□□□□ -1.53
URH1	YDR400W	GPI2	P46961	280 aa		5.5	□□□□□ -1.53
URH1	YDR400W	SSU72	P53538	206 aa	Predicted RBP	5.5	□□□□□ -1.53
URH1	YDR400W	ARL3	Q02804	198 aa		5.5	□□□□□ -1.53
URH1	YDR400W	MIX17	Q03667	156 aa		5.5	□□□□□ -1.53
URH1	YDR400W	ATC1	Q04005	294 aa		5.5	□□□□□ -1.53
URH1	YDR400W	YHP1	Q04116	353 aa		5.5	□□□□□ -1.53
URH1	YDR400W	YPR063C	Q12160	140 aa		5.5	□□□□□ -1.53
URH1	YDR400W	FMP49	A0A023PZB3	126 aa		5.49	□□□□□ -1.53
URH1	YDR400W	STF1	P01098	86 aa		5.49	□□□□□ -1.53
URH1	YDR400W	BGL2	P15703	313 aa	Known RBP	5.49	□□□□□ -1.53
URH1	YDR400W	MIG3	P39943	394 aa		5.49	□□□□□ -1.53
URH1	YDR400W	CYB5	P40312	120 aa		5.49	□□□□□ -1.53
URH1	YDR400W	DSK2	P48510	373 aa		5.49	□□□□□ -1.53
URH1	YDR400W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected
URH1	YDR400W	DAD3	P69850	94 aa		5.49	□□□□□ -1.53
URH1	YDR400W	LOA1	Q06508	300 aa		5.49	□□□□□ -1.53
URH1	YDR400W	HTB1	P02293	131 aa	Known RBP	5.48	□□□□□ -1.53
URH1	YDR400W	SPS100	P13130	326 aa		5.48	□□□□□ -1.53
URH1	YDR400W	IES6	P32617	166 aa		5.48	□□□□□ -1.53
URH1	YDR400W	MRPL28	P36527	147 aa		5.48	□□□□□ -1.53
URH1	YDR400W	GPI18	P38211	433 aa		5.48	□□□□□ -1.53
URH1	YDR400W	BDH1	P39714	382 aa		5.48	□□□□□ -1.53
URH1	YDR400W	OXA1	P39952	402 aa		5.48	□□□□□ -1.53
URH1	YDR400W	HIT1	P46973	164 aa		5.48	□□□□□ -1.53
URH1	YDR400W	ARR2	Q06597	130 aa		5.48	□□□□□ -1.53
URH1	YDR400W	TMC1	Q08422	150 aa	Predicted RBP	5.48	□□□□□ -1.53
URH1	YDR400W	YCL048W-A	Q2V2Q2	79 aa		5.48	□□□□□ -1.53
URH1	YDR400W	PRP8	P33334	2413 aa	Known RBP	5.48	□□□□□ -1.53
URH1	YDR400W	LST8	P41318	303 aa		5.47	□□□□□ -1.53
URH1	YDR400W	YGL185C	P53100	379 aa		5.47	□□□□□ -1.53
URH1	YDR400W	YGR018C	P53211	109 aa		5.47	□□□□□ -1.53
URH1	YDR400W	CPD1	P53314	239 aa		5.47	□□□□□ -1.53
URH1	YDR400W	YNR064C	P53750	290 aa		5.47	□□□□□ -1.53
URH1	YDR400W	MCH1	Q07376	486 aa		5.47	□□□□□ -1.53
URH1	YDR400W	SPO24	Q3E752	67 aa		5.47	□□□□□ -1.53
URH1	YDR400W	RAD23	P32628	398 aa	Known RBP	5.46	□□□□□ -1.54
URH1	YDR400W	SRP14	P38985	146 aa		5.46	□□□□□ -1.54
URH1	YDR400W	YER121W	P40076	114 aa		5.46	□□□□□ -1.54
URH1	YDR400W	PRE5	P40302	234 aa	Known RBP	5.46	□□□□□ -1.54
URH1	YDR400W	SBH2	P52871	88 aa		5.46	□□□□□ -1.54
URH1	YDR400W	ATO3	Q12359	275 aa		5.46	□□□□□ -1.54
URH1	YDR400W	YIL163C	P40448	117 aa		5.45	□□□□□ -1.54
URH1	YDR400W	KEG1	P43614	200 aa		5.45	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms