RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	MRPS9	P38120	278 aa		5.69	□□□□□ -1.5
SKP1	YDR328C	ATG8	P38182	117 aa	RIP-Chip data	5.69	□□□□□ -1.5	not detected
SKP1	YDR328C	PGD1	P40356	397 aa		5.69	□□□□□ -1.5
SKP1	YDR328C	AIM24	P47127	394 aa		5.69	□□□□□ -1.5
SKP1	YDR328C	NCE103	P53615	221 aa		5.69	□□□□□ -1.5
SKP1	YDR328C	ATX2	Q12067	313 aa		5.69	□□□□□ -1.5
SKP1	YDR328C	MRS1	P07266	363 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	YER190C-B	P0CX94	160 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	YEL077W-A	P0CX95	160 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	YGR296C-B	P0CX96	160 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	YPL283W-B	P0CX97	160 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	YPR204C-A	P0CX98	160 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	YFL068W	P0CX99	160 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	YLL066W-A	P0CY00	160 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	YLL067W-A	P0CY01	160 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	TIR2	P33890	251 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	SDH8	P38345	138 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	GPI2	P46961	280 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	PRM3	Q08931	133 aa		5.68	□□□□□ -1.5
SKP1	YDR328C	SNU23	Q12368	194 aa	Predicted RBP	5.68	□□□□□ -1.5
SKP1	YDR328C	COX2	P00410	251 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	SRP21	P32342	167 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	PHD1	P36093	366 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	YIL163C	P40448	117 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	PAU15	P40585	124 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	VMA21	P41806	77 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	YPI1	P43587	155 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	DAN1	P47178	298 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	RAV2	Q03956	351 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	LRS4	Q04087	347 aa	Known RBP	5.67	□□□□□ -1.5
SKP1	YDR328C	YPR013C	Q12145	317 aa		5.67	□□□□□ -1.5
SKP1	YDR328C	YIL077C	P40508	320 aa		5.66	□□□□□ -1.5
SKP1	YDR328C	HIT1	P46973	164 aa		5.66	□□□□□ -1.5
SKP1	YDR328C	TOM7	P53507	60 aa		5.66	□□□□□ -1.5
SKP1	YDR328C	DAD3	P69850	94 aa		5.66	□□□□□ -1.5
SKP1	YDR328C	STP4	Q07351	490 aa		5.66	□□□□□ -1.5
SKP1	YDR328C	YKL102C	P34249	101 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	SDH4	P37298	181 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	HSP10	P38910	106 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	SNF11	P38956	169 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	SRP14	P38985	146 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	MBB1	P39534	108 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	RPA43	P46669	326 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	YDL186W	P48568	277 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	MGA1	P53050	456 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	ATP19	P81451	68 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	UBC7	Q02159	165 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	ATG39	Q06159	398 aa		5.65	□□□□□ -1.5
SKP1	YDR328C	FMP49	A0A023PZB3	126 aa		5.64	□□□□□ -1.51
SKP1	YDR328C	NHP6A	P11632	93 aa	Known RBP	5.64	□□□□□ -1.51
SKP1	YDR328C	RPB3	P16370	318 aa	Known RBP	5.64	□□□□□ -1.51
SKP1	YDR328C	HUA1	P40325	198 aa		5.64	□□□□□ -1.51
SKP1	YDR328C	LCB3	P47013	409 aa		5.64	□□□□□ -1.51
SKP1	YDR328C	IZH1	Q03419	316 aa		5.64	□□□□□ -1.51
SKP1	YDR328C	YOL160W	Q08321	113 aa		5.64	□□□□□ -1.51
SKP1	YDR328C	YOP1	Q12402	180 aa		5.64	□□□□□ -1.51
SKP1	YDR328C	YGR035W-A	Q45U48	73 aa		5.64	□□□□□ -1.51
SKP1	YDR328C	YLR302C	O13544	120 aa		5.63	□□□□□ -1.51
SKP1	YDR328C	YHR212W-A	P0CX91	67 aa		5.63	□□□□□ -1.51
SKP1	YDR328C	CMC1	P36064	111 aa		5.63	□□□□□ -1.51
SKP1	YDR328C	YBR090C	P38253	122 aa		5.63	□□□□□ -1.51
SKP1	YDR328C	CAX4	P53223	239 aa		5.63	□□□□□ -1.51
SKP1	YDR328C	NAT3	Q06504	195 aa		5.63	□□□□□ -1.51
SKP1	YDR328C	ZEO1	Q08245	113 aa		5.63	□□□□□ -1.51
SKP1	YDR328C	DCN1	Q12395	269 aa		5.63	□□□□□ -1.51
SKP1	YDR328C	UTP20	P35194	2493 aa	Known RBP	5.62	□□□□□ -1.51
SKP1	YDR328C	HTB2	P02294	131 aa		5.62	□□□□□ -1.51
SKP1	YDR328C	TIR1	P10863	254 aa		5.62	□□□□□ -1.51
SKP1	YDR328C	MRPL20	P22354	195 aa	Predicted RBP	5.62	□□□□□ -1.51
SKP1	YDR328C	POF1	P25576	258 aa		5.62	□□□□□ -1.51
SKP1	YDR328C	YPT10	P38146	199 aa		5.62	□□□□□ -1.51
SKP1	YDR328C	AGE2	P40529	298 aa		5.62	□□□□□ -1.51
SKP1	YDR328C	GTT1	P40582	234 aa		5.62	□□□□□ -1.51
SKP1	YDR328C	NSE4	P43124	402 aa		5.62	□□□□□ -1.51
SKP1	YDR328C	MOG1	P47123	218 aa		5.62	□□□□□ -1.51
SKP1	YDR328C	YGR025W	P53216	100 aa		5.62	□□□□□ -1.51
SKP1	YDR328C	SMT3	Q12306	101 aa	Known RBP	5.62	□□□□□ -1.51
SKP1	YDR328C	UTR5	P32630	166 aa		5.61	□□□□□ -1.51
SKP1	YDR328C	YBR013C	P38215	129 aa		5.61	□□□□□ -1.51
SKP1	YDR328C	AME1	P38313	324 aa		5.61	□□□□□ -1.51
SKP1	YDR328C	YGL185C	P53100	379 aa		5.61	□□□□□ -1.51
SKP1	YDR328C	APS2	Q00381	147 aa		5.61	□□□□□ -1.51
SKP1	YDR328C	MSN1	P22148	382 aa		5.6	□□□□□ -1.51
SKP1	YDR328C	QRI5	P32344	111 aa		5.6	□□□□□ -1.51
SKP1	YDR328C	MST28	P39552	234 aa		5.6	□□□□□ -1.51
SKP1	YDR328C	PAU5	P43575	122 aa		5.6	□□□□□ -1.51
SKP1	YDR328C	MST27	P53176	234 aa		5.6	□□□□□ -1.51
SKP1	YDR328C	CGR1	P53188	120 aa		5.6	□□□□□ -1.51
SKP1	YDR328C	IZH3	Q07959	543 aa		5.6	□□□□□ -1.51
SKP1	YDR328C	GEP3	Q08622	556 aa		5.6	□□□□□ -1.51
SKP1	YDR328C	TAR1	Q8TGM6	124 aa		5.6	□□□□□ -1.51
SKP1	YDR328C	RPL31B	P0C2H9	113 aa	Known RBP	5.59	□□□□□ -1.51
SKP1	YDR328C	MRPL33	P20084	86 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	FZF1	P32805	299 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	YBR144C	P34215	104 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	SPI1	P40092	148 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	YMR141C	P40211	102 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	MRPL49	P40858	161 aa	Predicted RBP	5.59	□□□□□ -1.51
SKP1	YDR328C	TDA4	P47153	279 aa		5.59	□□□□□ -1.51
SKP1	YDR328C	COX18	P53239	316 aa		5.59	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms