RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YHR212W-AP0CX91 67 aa1.99□□□□□ -2.09
SHU2YDR078C RPC19P28000 142 aaKnown RBP1.99□□□□□ -2.09
SHU2YDR078C GLC8P41818 229 aa1.99□□□□□ -2.09
SHU2YDR078C ATP19P81451 68 aa1.99□□□□□ -2.09
SHU2YDR078C SCS22Q6Q595 175 aa1.99□□□□□ -2.09
SHU2YDR078C SHB17P36136 271 aaKnown RBP1.98□□□□□ -2.09
SHU2YDR078C YGR039WP53225 103 aa1.98□□□□□ -2.09
SHU2YDR078C IRC19Q07843 230 aa1.98□□□□□ -2.09
SHU2YDR078C TAF2P23255 1407 aa1.98□□□□□ -2.09
SHU2YDR078C SUI1P32911 108 aaKnown RBP1.97□□□□□ -2.09
SHU2YDR078C MRPL15P36523 253 aa1.97□□□□□ -2.09
SHU2YDR078C CYC2P38909 366 aa1.97□□□□□ -2.09
SHU2YDR078C YGL230CP53074 147 aa1.97□□□□□ -2.09
SHU2YDR078C HHO1P53551 258 aa1.97□□□□□ -2.09
SHU2YDR078C CSN9Q03981 162 aa1.97□□□□□ -2.09
SHU2YDR078C KEI1Q06346 221 aa1.97□□□□□ -2.09
SHU2YDR078C CMC4Q3E7A9 73 aa1.97□□□□□ -2.09
SHU2YDR078C VAR1P02381 398 aa1.96□□□□□ -2.1
SHU2YDR078C YGL041W-AP0C5N3 154 aa1.96□□□□□ -2.1
SHU2YDR078C RIB3Q99258 208 aa1.96□□□□□ -2.1
SHU2YDR078C YEL014CP39999 101 aa1.95□□□□□ -2.1
SHU2YDR078C FIT1Q04433 528 aa1.95□□□□□ -2.1
SHU2YDR078C YPR203WQ08994 102 aa1.95□□□□□ -2.1
SHU2YDR078C PRE1P22141 198 aaKnown RBP1.94□□□□□ -2.1
SHU2YDR078C PHB1P40961 287 aa1.94□□□□□ -2.1
SHU2YDR078C YGL204CP53089 101 aa1.94□□□□□ -2.1
SHU2YDR078C YGR042WP53227 271 aa1.94□□□□□ -2.1
SHU2YDR078C SPC2Q04969 178 aa1.94□□□□□ -2.1
SHU2YDR078C SPC3Q12133 184 aa1.94□□□□□ -2.1
SHU2YDR078C KIN28P06242 306 aa1.93□□□□□ -2.1
SHU2YDR078C HSP150P32478 413 aa1.93□□□□□ -2.1
SHU2YDR078C GIM4P40005 111 aaKnown RBP1.93□□□□□ -2.1
SHU2YDR078C APS3P47064 194 aa1.93□□□□□ -2.1
SHU2YDR078C CYR1P08678 2026 aaKnown RBP1.93□□□□□ -2.1
SHU2YDR078C YHR140WP38842 239 aa1.92□□□□□ -2.1
SHU2YDR078C IPT1P38954 527 aa1.92□□□□□ -2.1
SHU2YDR078C COX5BP00425 151 aa1.91□□□□□ -2.1
SHU2YDR078C YKR070WP36151 352 aaKnown RBP1.91□□□□□ -2.1
SHU2YDR078C ECM31P38122 312 aa1.91□□□□□ -2.1
SHU2YDR078C POP7P38291 140 aa1.91□□□□□ -2.1
SHU2YDR078C VMA10P48836 114 aaKnown RBP1.91□□□□□ -2.1
SHU2YDR078C YPR153WQ06537 140 aa1.91□□□□□ -2.1
SHU2YDR078C YNL019CP53975 284 aa1.9□□□□□ -2.11
SHU2YDR078C YCL001W-AP87012 153 aa1.9□□□□□ -2.11
SHU2YDR078C UBR2Q07963 1872 aa1.9□□□□□ -2.11
SHU2YDR078C ACC1Q00955 2233 aaKnown RBP1.9□□□□□ -2.11
SHU2YDR078C RPS1BP23248 255 aaKnown RBP1.89□□□□□ -2.11
SHU2YDR078C YHL037CP38733 133 aa1.89□□□□□ -2.11
SHU2YDR078C YFL051CP43552 160 aa1.89□□□□□ -2.11
SHU2YDR078C LSM8P47093 109 aaKnown RBP1.89□□□□□ -2.11
SHU2YDR078C SPG1P50088 95 aa1.89□□□□□ -2.11
SHU2YDR078C YLR361C-AQ3E795 98 aa1.89□□□□□ -2.11
SHU2YDR078C FYV5P25585 152 aa1.88□□□□□ -2.11
SHU2YDR078C SUA7P29055 345 aaPredicted RBP1.88□□□□□ -2.11
SHU2YDR078C RPL14AP36105 138 aaKnown RBP1.88□□□□□ -2.11
SHU2YDR078C RPL14BP38754 138 aaKnown RBP1.88□□□□□ -2.11
SHU2YDR078C DIE2P50076 525 aa1.88□□□□□ -2.11
SHU2YDR078C EMC4P53073 190 aa1.88□□□□□ -2.11
SHU2YDR078C GPI11Q06636 219 aa1.88□□□□□ -2.11
SHU2YDR078C ATP14Q12349 124 aa1.88□□□□□ -2.11
SHU2YDR078C NHP6AP11632 93 aaKnown RBP1.87□□□□□ -2.11
SHU2YDR078C YBR027CP38220 110 aa1.87□□□□□ -2.11
SHU2YDR078C TRS20P38334 175 aa1.87□□□□□ -2.11
SHU2YDR078C HPM1P40481 377 aa1.87□□□□□ -2.11
SHU2YDR078C SOM1Q05676 74 aa1.87□□□□□ -2.11
SHU2YDR078C VAM10Q08474 114 aa1.87□□□□□ -2.11
SHU2YDR078C FCY1Q12178 158 aa1.87□□□□□ -2.11
SHU2YDR078C HUT1Q12520 339 aa1.87□□□□□ -2.11
SHU2YDR078C HYP2P23301 157 aaKnown RBP1.86□□□□□ -2.11
SHU2YDR078C DCV1P43595 202 aa1.86□□□□□ -2.11
SHU2YDR078C YOR385WQ08909 290 aa1.86□□□□□ -2.11
SHU2YDR078C ATG8P38182 117 aaRIP-Chip data1.85□□□□□ -2.11not detected
SHU2YDR078C PRS3P38689 320 aaKnown RBP1.85□□□□□ -2.11
SHU2YDR078C TIM8P57744 87 aa1.85□□□□□ -2.11
SHU2YDR078C ELC1Q03071 99 aa1.85□□□□□ -2.11
SHU2YDR078C YMR007WQ03675 126 aa1.85□□□□□ -2.11
SHU2YDR078C RAF1Q06891 181 aa1.85□□□□□ -2.11
SHU2YDR078C DDP1Q99321 188 aaKnown RBP1.85□□□□□ -2.11
SHU2YDR078C FMP49A0A023PZB3 126 aa1.84□□□□□ -2.11
SHU2YDR078C YGR017WP53210 297 aa1.84□□□□□ -2.11
SHU2YDR078C YDR278CQ05612 105 aa1.84□□□□□ -2.11
SHU2YDR078C YCR050CP25630 102 aa1.83□□□□□ -2.12
SHU2YDR078C HYM1P32464 399 aa1.83□□□□□ -2.12
SHU2YDR078C RPS1AP33442 255 aaKnown RBP1.83□□□□□ -2.12
SHU2YDR078C RPS20P38701 121 aaKnown RBP1.83□□□□□ -2.12
SHU2YDR078C CNL1Q06333 122 aa1.83□□□□□ -2.12
SHU2YDR078C YNL277W-AQ3E7Z0 62 aa1.83□□□□□ -2.12
SHU2YDR078C DYN2Q02647 92 aa1.82□□□□□ -2.12
SHU2YDR078C TMA23Q03525 211 aa1.82□□□□□ -2.12
SHU2YDR078C MHF1Q3E835 90 aa1.82□□□□□ -2.12
SHU2YDR078C YAL064WP39711 94 aa1.81□□□□□ -2.12
SHU2YDR078C TVP18Q04767 167 aa1.81□□□□□ -2.12
SHU2YDR078C NAT5Q08689 176 aa1.81□□□□□ -2.12
SHU2YDR078C MRPL44P19956 98 aa1.8□□□□□ -2.12
SHU2YDR078C SED1Q01589 338 aa1.8□□□□□ -2.12
SHU2YDR078C SEN15Q04675 128 aa1.8□□□□□ -2.12
SHU2YDR078C RPL33AP05744 107 aaKnown RBP1.79□□□□□ -2.12
SHU2YDR078C YAR064WP39563 99 aa1.79□□□□□ -2.12
SHU2YDR078C HUA1P40325 198 aa1.79□□□□□ -2.12
SHU2YDR078C CCW12Q12127 133 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms