RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W RPS16AP0CX51 143 aaKnown RBP5.54□□□□□ -1.52
BDF2YDL070W RPS16BP0CX52 143 aaKnown RBP5.54□□□□□ -1.52
BDF2YDL070W DAL80P26343 269 aa5.54□□□□□ -1.52
BDF2YDL070W SOR1P35497 357 aaKnown RBP5.54□□□□□ -1.52
BDF2YDL070W YHR138CP38841 114 aaPredicted RBP5.54□□□□□ -1.52
BDF2YDL070W YAR068WP39564 161 aa5.54□□□□□ -1.52
BDF2YDL070W YIL012WP40551 113 aa5.54□□□□□ -1.52
BDF2YDL070W SOR2Q07786 357 aa5.54□□□□□ -1.52
BDF2YDL070W THI72Q08579 599 aa5.54□□□□□ -1.52
BDF2YDL070W YPS3Q12303 508 aa5.54□□□□□ -1.52
BDF2YDL070W BOL1Q3E793 110 aa5.54□□□□□ -1.52
BDF2YDL070W BRR2P32639 2163 aaKnown RBP5.54□□□□□ -1.52
BDF2YDL070W CDC43P18898 376 aa5.53□□□□□ -1.52
BDF2YDL070W IMP1P28627 190 aa5.53□□□□□ -1.52
BDF2YDL070W NUP42P49686 430 aaKnown RBP5.53□□□□□ -1.52
BDF2YDL070W CRZ1P53968 678 aa5.53□□□□□ -1.52
BDF2YDL070W ATP19P81451 68 aa5.53□□□□□ -1.52
BDF2YDL070W NCE102Q12207 173 aaRIP-Chip data5.53□□□□□ -1.52not detected
BDF2YDL070W YOS1Q3E834 85 aa5.53□□□□□ -1.52
BDF2YDL070W YHR173CP38864 112 aa5.52□□□□□ -1.53
BDF2YDL070W HUA1P40325 198 aa5.52□□□□□ -1.53
BDF2YDL070W YJL163CP46996 555 aa5.52□□□□□ -1.53
BDF2YDL070W YDR391CQ04170 232 aa5.52□□□□□ -1.53
BDF2YDL070W API2Q04413 109 aa5.52□□□□□ -1.53
BDF2YDL070W SNA4Q07549 140 aa5.52□□□□□ -1.53
BDF2YDL070W YDR215CQ12240 137 aa5.52□□□□□ -1.53
BDF2YDL070W POL2P21951 2222 aaKnown RBP5.52□□□□□ -1.53
BDF2YDL070W UTH1P36135 365 aa5.52□□□□□ -1.53
BDF2YDL070W DOG2P38773 246 aa5.52□□□□□ -1.53
BDF2YDL070W LCL3P53153 274 aa5.52□□□□□ -1.53
BDF2YDL070W SNP1Q00916 300 aaPredicted RBP5.52□□□□□ -1.53
BDF2YDL070W ELC1Q03071 99 aa5.52□□□□□ -1.53
BDF2YDL070W YHP1Q04116 353 aa5.52□□□□□ -1.53
BDF2YDL070W ROX3P25046 220 aa5.51□□□□□ -1.53
BDF2YDL070W YKL069WP36088 180 aa5.51□□□□□ -1.53
BDF2YDL070W PRS4P38063 326 aaPredicted RBP5.51□□□□□ -1.53
BDF2YDL070W RAV2Q03956 351 aa5.51□□□□□ -1.53
BDF2YDL070W HSP12P22943 109 aaKnown RBP5.5□□□□□ -1.53
BDF2YDL070W FZF1P32805 299 aa5.5□□□□□ -1.53
BDF2YDL070W REC104P33323 182 aa5.5□□□□□ -1.53
BDF2YDL070W ECM14P38836 430 aa5.5□□□□□ -1.53
BDF2YDL070W TIF34P40217 347 aaKnown RBP5.5□□□□□ -1.53
BDF2YDL070W UBC13P52490 153 aa5.5□□□□□ -1.53
BDF2YDL070W YMR210WQ03649 449 aa5.5□□□□□ -1.53
BDF2YDL070W YCR075W-AQ3E830 75 aa5.5□□□□□ -1.53
BDF2YDL070W YKR073CP36153 106 aa5.5□□□□□ -1.53
BDF2YDL070W YIL029CP40538 142 aa5.5□□□□□ -1.53
BDF2YDL070W CIS3P47001 227 aa5.5□□□□□ -1.53
BDF2YDL070W TOM7P53507 60 aa5.5□□□□□ -1.53
BDF2YDL070W IRC25Q07951 179 aa5.5□□□□□ -1.53
BDF2YDL070W TIM18Q08749 192 aa5.5□□□□□ -1.53
BDF2YDL070W PRM3Q08931 133 aa5.5□□□□□ -1.53
BDF2YDL070W AYT1Q12226 474 aa5.5□□□□□ -1.53
BDF2YDL070W YGL258W-AQ3E740 77 aa5.5□□□□□ -1.53
BDF2YDL070W VPS63O13549 108 aa5.49□□□□□ -1.53
BDF2YDL070W YOR304C-AO14468 76 aa5.49□□□□□ -1.53
BDF2YDL070W RPL7AP05737 244 aaKnown RBP5.49□□□□□ -1.53
BDF2YDL070W INO4P13902 151 aa5.49□□□□□ -1.53
BDF2YDL070W TOM40P23644 387 aaKnown RBP5.49□□□□□ -1.53
BDF2YDL070W SFT2P38166 215 aa5.49□□□□□ -1.53
BDF2YDL070W YJR096WP47137 282 aa5.49□□□□□ -1.53
BDF2YDL070W HTL1Q9URQ5 78 aa5.49□□□□□ -1.53
BDF2YDL070W MRPL31P14063 131 aaPredicted RBP5.48□□□□□ -1.53
BDF2YDL070W YPT10P38146 199 aa5.48□□□□□ -1.53
BDF2YDL070W YPI1P43587 155 aa5.48□□□□□ -1.53
BDF2YDL070W YFR045WP43617 309 aa5.48□□□□□ -1.53
BDF2YDL070W PCP1P53259 346 aa5.48□□□□□ -1.53
BDF2YDL070W HSK3P69852 69 aa5.48□□□□□ -1.53
BDF2YDL070W UPS1Q05776 175 aa5.48□□□□□ -1.53
BDF2YDL070W MDM10P18409 493 aa5.48□□□□□ -1.53
BDF2YDL070W YNL092WP53934 400 aa5.48□□□□□ -1.53
BDF2YDL070W FIT2Q08906 153 aa5.48□□□□□ -1.53
BDF2YDL070W ISD11Q6Q560 94 aa5.48□□□□□ -1.53
BDF2YDL070W CYC3P06182 269 aa5.47□□□□□ -1.53
BDF2YDL070W APS1P35181 156 aa5.47□□□□□ -1.53
BDF2YDL070W YIL086CP40503 102 aa5.47□□□□□ -1.53
BDF2YDL070W REE1P40893 198 aa5.47□□□□□ -1.53
BDF2YDL070W OST1P41543 476 aaKnown RBP5.47□□□□□ -1.53
BDF2YDL070W GZF3P42944 551 aaKnown RBP5.47□□□□□ -1.53
BDF2YDL070W YLR296WQ05898 108 aa5.47□□□□□ -1.53
BDF2YDL070W ATG33Q06485 197 aa5.47□□□□□ -1.53
BDF2YDL070W YDL218WQ07629 317 aa5.47□□□□□ -1.53
BDF2YDL070W PIS1P06197 220 aaKnown RBP5.46□□□□□ -1.53
BDF2YDL070W YPS1P32329 569 aa5.46□□□□□ -1.53
BDF2YDL070W ICS2P38284 255 aa5.46□□□□□ -1.53
BDF2YDL070W YGP1P38616 354 aaKnown RBP5.46□□□□□ -1.53
BDF2YDL070W ATX1P38636 73 aa5.46□□□□□ -1.53
BDF2YDL070W SNF11P38956 169 aa5.46□□□□□ -1.53
BDF2YDL070W PAU7P39545 55 aa5.46□□□□□ -1.53
BDF2YDL070W YPL080CQ02826 108 aa5.46□□□□□ -1.53
BDF2YDL070W CSF1Q12150 2958 aa5.46□□□□□ -1.54
BDF2YDL070W YMR31P19955 123 aa5.46□□□□□ -1.54
BDF2YDL070W DUT1P33317 147 aa5.46□□□□□ -1.54
BDF2YDL070W YKL044WP36092 106 aa5.46□□□□□ -1.54
BDF2YDL070W PGU1P47180 361 aa5.46□□□□□ -1.54
BDF2YDL070W GTO3Q04806 366 aa5.46□□□□□ -1.54
BDF2YDL070W RAF1Q06891 181 aa5.46□□□□□ -1.54
BDF2YDL070W WSC3Q12215 556 aa5.46□□□□□ -1.54
BDF2YDL070W HEM4P06174 275 aa5.45□□□□□ -1.54
BDF2YDL070W YHR214C-DP0CX93 97 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 102.4 ms