RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W FRM2P37261 193 aa3.01□□□□□ -1.93
TSR1YDL060W DER1P38307 211 aa3.01□□□□□ -1.93
TSR1YDL060W SWM2P40342 146 aa3.01□□□□□ -1.93
TSR1YDL060W YGL262WP53054 175 aa3.01□□□□□ -1.93
TSR1YDL060W YGR015CP53208 328 aa3.01□□□□□ -1.93
TSR1YDL060W RSM10Q03201 203 aa3.01□□□□□ -1.93
TSR1YDL060W TSA2Q04120 196 aa3.01□□□□□ -1.93
TSR1YDL060W YTH1Q06102 208 aaPredicted RBP3.01□□□□□ -1.93
TSR1YDL060W TRX3P25372 127 aa3□□□□□ -1.93
TSR1YDL060W YKR041WP36134 250 aa3□□□□□ -1.93
TSR1YDL060W SHB17P36136 271 aaKnown RBP3□□□□□ -1.93
TSR1YDL060W PAM17P36147 197 aa3□□□□□ -1.93
TSR1YDL060W ECM33P38248 429 aaKnown RBP3□□□□□ -1.93
TSR1YDL060W YNL208WP40159 199 aaKnown RBP3□□□□□ -1.93
TSR1YDL060W PHS1P40857 217 aa3□□□□□ -1.93
TSR1YDL060W BXI1P48558 297 aa3□□□□□ -1.93
TSR1YDL060W SDS23P53172 527 aa3□□□□□ -1.93
TSR1YDL060W YPL278CQ08990 100 aa3□□□□□ -1.93
TSR1YDL060W IZH2Q12442 317 aa3□□□□□ -1.93
TSR1YDL060W COA2Q3E823 68 aa3□□□□□ -1.93
TSR1YDL060W YPR096CO13587 100 aa3□□□□□ -1.93
TSR1YDL060W YOR304C-AO14468 76 aa3□□□□□ -1.93
TSR1YDL060W ADH1P00330 348 aaKnown RBP3□□□□□ -1.93
TSR1YDL060W RPS8AP0CX39 200 aaKnown RBP3□□□□□ -1.93
TSR1YDL060W RPS8BP0CX40 200 aaKnown RBP3□□□□□ -1.93
TSR1YDL060W SCO1P23833 295 aa3□□□□□ -1.93
TSR1YDL060W UMP1P38293 148 aa3□□□□□ -1.93
TSR1YDL060W YHL044WP38727 235 aa3□□□□□ -1.93
TSR1YDL060W TRR2P38816 342 aa3□□□□□ -1.93
TSR1YDL060W YEA6P39953 335 aa3□□□□□ -1.93
TSR1YDL060W HMF1P40037 129 aaKnown RBP3□□□□□ -1.93
TSR1YDL060W YJR015WP47090 510 aa3□□□□□ -1.93
TSR1YDL060W SBH2P52871 88 aa3□□□□□ -1.93
TSR1YDL060W PAU23Q07987 124 aa3□□□□□ -1.93
TSR1YDL060W ATO3Q12359 275 aa3□□□□□ -1.93
TSR1YDL060W PAU17Q12370 124 aa3□□□□□ -1.93
TSR1YDL060W YOL162WP0CF19 215 aa2.99□□□□□ -1.93
TSR1YDL060W TIR1P10863 254 aa2.99□□□□□ -1.93
TSR1YDL060W CUP2P15315 225 aa2.99□□□□□ -1.93
TSR1YDL060W MCK1P21965 375 aaKnown RBP2.99□□□□□ -1.93
TSR1YDL060W MRPL27P36526 146 aaPredicted RBP2.99□□□□□ -1.93
TSR1YDL060W MRPL39P36533 70 aa2.99□□□□□ -1.93
TSR1YDL060W YER076CP40049 302 aa2.99□□□□□ -1.93
TSR1YDL060W CRH1P53301 507 aa2.99□□□□□ -1.93
TSR1YDL060W RPL21AQ02753 160 aaKnown RBP2.99□□□□□ -1.93
TSR1YDL060W MRX8Q05473 314 aa2.99□□□□□ -1.93
TSR1YDL060W SYM1Q06563 197 aa2.99□□□□□ -1.93
TSR1YDL060W YOR376WQ08900 122 aa2.99□□□□□ -1.93
TSR1YDL060W FCY1Q12178 158 aa2.99□□□□□ -1.93
TSR1YDL060W RPL21BQ12672 160 aaKnown RBP2.99□□□□□ -1.93
TSR1YDL060W RPL13AQ12690 199 aaPredicted RBP2.99□□□□□ -1.93
TSR1YDL060W BRR2P32639 2163 aaKnown RBP2.99□□□□□ -1.93
TSR1YDL060W ACC1Q00955 2233 aaKnown RBP2.99□□□□□ -1.93
TSR1YDL060W RPS28BP0C0X0 67 aaKnown RBP2.98□□□□□ -1.93
TSR1YDL060W DPM1P14020 267 aaKnown RBP2.98□□□□□ -1.93
TSR1YDL060W SEC11P15367 167 aa2.98□□□□□ -1.93
TSR1YDL060W ECM34P38728 170 aa2.98□□□□□ -1.93
TSR1YDL060W RPS28AQ3E7X9 67 aaPredicted RBP2.98□□□□□ -1.93
TSR1YDL060W ISD11Q6Q560 94 aa2.98□□□□□ -1.93
TSR1YDL060W YGL010WP25338 174 aa2.98□□□□□ -1.93
TSR1YDL060W YNL046WP53956 172 aa2.98□□□□□ -1.93
TSR1YDL060W HRT1Q08273 121 aa2.98□□□□□ -1.93
TSR1YDL060W MSA1Q08471 629 aa2.98□□□□□ -1.93
TSR1YDL060W YOR186WQ08560 144 aa2.98□□□□□ -1.93
TSR1YDL060W PRM3Q08931 133 aa2.98□□□□□ -1.93
TSR1YDL060W YPR011CQ12251 326 aa2.98□□□□□ -1.93
TSR1YDL060W HUT1Q12520 339 aa2.98□□□□□ -1.93
TSR1YDL060W YLR361C-AQ3E795 98 aa2.98□□□□□ -1.93
TSR1YDL060W NAG1Q8TGN9 163 aa2.98□□□□□ -1.93
TSR1YDL060W MRS1P07266 363 aa2.97□□□□□ -1.93
TSR1YDL060W PHO85P17157 305 aa2.97□□□□□ -1.93
TSR1YDL060W SPO13P23624 291 aa2.97□□□□□ -1.93
TSR1YDL060W PCL1P24867 279 aa2.97□□□□□ -1.93
TSR1YDL060W RPS20P38701 121 aaKnown RBP2.97□□□□□ -1.93
TSR1YDL060W TEM1P38987 245 aa2.97□□□□□ -1.93
TSR1YDL060W GIS2P53849 153 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
TSR1YDL060W PET191Q02772 108 aa2.97□□□□□ -1.93
TSR1YDL060W IMP1P28627 190 aa2.97□□□□□ -1.93
TSR1YDL060W MDH3P32419 343 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
TSR1YDL060W SLM6P38343 150 aa2.97□□□□□ -1.93
TSR1YDL060W PRE5P40302 234 aaKnown RBP2.97□□□□□ -1.93
TSR1YDL060W YGR018CP53211 109 aa2.97□□□□□ -1.93
TSR1YDL060W RNH201P53942 307 aa2.97□□□□□ -1.93
TSR1YDL060W ABF2Q02486 183 aa2.97□□□□□ -1.93
TSR1YDL060W LIP2Q06005 328 aa2.97□□□□□ -1.93
TSR1YDL060W YOL024WQ08172 172 aa2.97□□□□□ -1.93
TSR1YDL060W YMR230W-AQ3E7B5 62 aa2.97□□□□□ -1.93
TSR1YDL060W IGO2Q9P305 131 aa2.97□□□□□ -1.93
TSR1YDL060W CYR1P08678 2026 aaKnown RBP2.97□□□□□ -1.93
TSR1YDL060W PAI3P01094 68 aa2.96□□□□□ -1.94
TSR1YDL060W NHP6AP11632 93 aaKnown RBP2.96□□□□□ -1.94
TSR1YDL060W PEX17P40155 199 aa2.96□□□□□ -1.94
TSR1YDL060W RPL13BP40212 199 aaKnown RBP2.96□□□□□ -1.94
TSR1YDL060W HUA1P40325 198 aa2.96□□□□□ -1.94
TSR1YDL060W GPI14P47088 403 aaKnown RBP2.96□□□□□ -1.94
TSR1YDL060W TTI2P47168 421 aa2.96□□□□□ -1.94
TSR1YDL060W YGL034CP53186 121 aa2.96□□□□□ -1.94
TSR1YDL060W HHT1P61830 136 aa2.96□□□□□ -1.94
TSR1YDL060W YMR082CQ04276 118 aa2.96□□□□□ -1.94
TSR1YDL060W CNL1Q06333 122 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms