RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W FLO5P38894 1075 aa4.39□□□□□ -1.71
SHM1YBR263W EMC5P40540 141 aa4.39□□□□□ -1.71
SHM1YBR263W MIC27P50945 234 aa4.39□□□□□ -1.71
SHM1YBR263W CAB4P53332 305 aa4.39□□□□□ -1.71
SHM1YBR263W ADD37Q03233 198 aa4.39□□□□□ -1.71
SHM1YBR263W SHH3Q04487 196 aa4.39□□□□□ -1.71
SHM1YBR263W CTR3Q06686 241 aa4.39□□□□□ -1.71
SHM1YBR263W YBR085C-AO43137 85 aa4.38□□□□□ -1.71
SHM1YBR263W CYC3P06182 269 aa4.38□□□□□ -1.71
SHM1YBR263W YHR212W-AP0CX91 67 aa4.38□□□□□ -1.71
SHM1YBR263W POP5P28005 173 aa4.38□□□□□ -1.71
SHM1YBR263W YKL070WP36087 169 aa4.38□□□□□ -1.71
SHM1YBR263W SHG1P38337 142 aa4.38□□□□□ -1.71
SHM1YBR263W YNL194CP40169 301 aa4.38□□□□□ -1.71
SHM1YBR263W YCL001W-AP87012 153 aa4.38□□□□□ -1.71
SHM1YBR263W YMR007WQ03675 126 aa4.38□□□□□ -1.71
SHM1YBR263W AVO2Q04749 426 aa4.38□□□□□ -1.71
SHM1YBR263W PRM3Q08931 133 aa4.38□□□□□ -1.71
SHM1YBR263W YOR015WQ12169 119 aa4.38□□□□□ -1.71
SHM1YBR263W YOR304C-AO14468 76 aa4.37□□□□□ -1.71
SHM1YBR263W CDC7P06243 507 aa4.37□□□□□ -1.71
SHM1YBR263W QCR9P22289 66 aa4.37□□□□□ -1.71
SHM1YBR263W SCM4P32564 187 aa4.37□□□□□ -1.71
SHM1YBR263W SHB17P36136 271 aaKnown RBP4.37□□□□□ -1.71
SHM1YBR263W DER1P38307 211 aa4.37□□□□□ -1.71
SHM1YBR263W YBR292CP38357 123 aa4.37□□□□□ -1.71
SHM1YBR263W SNU13P39990 126 aaKnown RBP4.37□□□□□ -1.71
SHM1YBR263W GLE2P40066 365 aa4.37□□□□□ -1.71
SHM1YBR263W YAR1P46683 200 aa4.37□□□□□ -1.71
SHM1YBR263W YJL027CP47063 138 aaPredicted RBP4.37□□□□□ -1.71
SHM1YBR263W UBC12P52491 188 aa4.37□□□□□ -1.71
SHM1YBR263W OCA2P53949 197 aa4.37□□□□□ -1.71
SHM1YBR263W ODC1Q03028 310 aa4.37□□□□□ -1.71
SHM1YBR263W TIM18Q08749 192 aa4.37□□□□□ -1.71
SHM1YBR263W YBR182C-AQ8TGU6 64 aa4.37□□□□□ -1.71
SHM1YBR263W DFR1P07807 211 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
SHM1YBR263W YHR213WP0CI67 198 aa4.37□□□□□ -1.71
SHM1YBR263W SPC25P40014 221 aa4.37□□□□□ -1.71
SHM1YBR263W SAS2P40963 338 aa4.37□□□□□ -1.71
SHM1YBR263W HIT1P46973 164 aa4.37□□□□□ -1.71
SHM1YBR263W ATG27P46989 271 aa4.37□□□□□ -1.71
SHM1YBR263W RIB4P50861 169 aaPredicted RBP4.37□□□□□ -1.71
SHM1YBR263W ERV14P53173 138 aa4.37□□□□□ -1.71
SHM1YBR263W HST4P53688 370 aa4.37□□□□□ -1.71
SHM1YBR263W YMR253CQ04835 414 aa4.37□□□□□ -1.71
SHM1YBR263W YPR013CQ12145 317 aa4.37□□□□□ -1.71
SHM1YBR263W ATP14Q12349 124 aa4.37□□□□□ -1.71
SHM1YBR263W COX19Q3E731 98 aa4.37□□□□□ -1.71
SHM1YBR263W YLR361C-AQ3E795 98 aa4.37□□□□□ -1.71
SHM1YBR263W SEC59P20048 519 aa4.36□□□□□ -1.71
SHM1YBR263W ZRC1P20107 442 aa4.36□□□□□ -1.71
SHM1YBR263W PRE1P22141 198 aaKnown RBP4.36□□□□□ -1.71
SHM1YBR263W SRP14P38985 146 aa4.36□□□□□ -1.71
SHM1YBR263W UIP3P39547 235 aa4.36□□□□□ -1.71
SHM1YBR263W IMP2P46972 177 aa4.36□□□□□ -1.71
SHM1YBR263W YIP3P53633 176 aa4.36□□□□□ -1.71
SHM1YBR263W FMP41P53889 259 aaKnown RBP4.36□□□□□ -1.71
SHM1YBR263W SDH7Q04401 133 aa4.36□□□□□ -1.71
SHM1YBR263W AYT1Q12226 474 aa4.36□□□□□ -1.71
SHM1YBR263W MRPL44P19956 98 aa4.35□□□□□ -1.71
SHM1YBR263W SFT2P38166 215 aa4.35□□□□□ -1.71
SHM1YBR263W LSM2P38203 95 aaKnown RBP4.35□□□□□ -1.71
SHM1YBR263W POR2P40478 281 aa4.35□□□□□ -1.71
SHM1YBR263W SNN1P48232 102 aa4.35□□□□□ -1.71
SHM1YBR263W GLO1P50107 326 aa4.35□□□□□ -1.71
SHM1YBR263W CAX4P53223 239 aa4.35□□□□□ -1.71
SHM1YBR263W SNO1Q03144 224 aa4.35□□□□□ -1.71
SHM1YBR263W TMA23Q03525 211 aa4.35□□□□□ -1.71
SHM1YBR263W POM33Q12164 279 aa4.35□□□□□ -1.71
SHM1YBR263W MIG1P27705 504 aa4.34□□□□□ -1.71
SHM1YBR263W ALK2P32789 676 aaPredicted RBP4.34□□□□□ -1.71
SHM1YBR263W RPL14AP36105 138 aaKnown RBP4.34□□□□□ -1.71
SHM1YBR263W RPL14BP38754 138 aaKnown RBP4.34□□□□□ -1.71
SHM1YBR263W SMD3P43321 101 aaKnown RBP4.34□□□□□ -1.71
SHM1YBR263W YPI1P43587 155 aa4.34□□□□□ -1.71
SHM1YBR263W DSK2P48510 373 aa4.34□□□□□ -1.71
SHM1YBR263W VPS71Q03433 280 aa4.34□□□□□ -1.71
SHM1YBR263W YIR021W-AQ3E739 70 aa4.34□□□□□ -1.71
SHM1YBR263W DDI2P0CH63 225 aa4.33□□□□□ -1.72
SHM1YBR263W DDI3P0CH64 225 aa4.33□□□□□ -1.72
SHM1YBR263W MSK1P32048 576 aa4.33□□□□□ -1.72
SHM1YBR263W UTR5P32630 166 aa4.33□□□□□ -1.72
SHM1YBR263W YBR144CP34215 104 aa4.33□□□□□ -1.72
SHM1YBR263W POG1P40473 351 aa4.33□□□□□ -1.72
SHM1YBR263W MRPL49P40858 161 aaPredicted RBP4.33□□□□□ -1.72
SHM1YBR263W YGR026WP53217 278 aa4.33□□□□□ -1.72
SHM1YBR263W YNR071CP53757 342 aa4.33□□□□□ -1.72
SHM1YBR263W TVP18Q04767 167 aa4.33□□□□□ -1.72
SHM1YBR263W ATG39Q06159 398 aa4.33□□□□□ -1.72
SHM1YBR263W LDS2Q08218 356 aa4.33□□□□□ -1.72
SHM1YBR263W ATX2Q12067 313 aa4.33□□□□□ -1.72
SHM1YBR263W SLO1Q3E784 85 aa4.33□□□□□ -1.72
SHM1YBR263W RPS28BP0C0X0 67 aaKnown RBP4.32□□□□□ -1.72
SHM1YBR263W MRPL4P36517 319 aa4.32□□□□□ -1.72
SHM1YBR263W TRS20P38334 175 aa4.32□□□□□ -1.72
SHM1YBR263W PAU4P53427 120 aa4.32□□□□□ -1.72
SHM1YBR263W SME1Q12330 94 aaPredicted RBP4.32□□□□□ -1.72
SHM1YBR263W VMA9Q3E7B6 73 aa4.32□□□□□ -1.72
SHM1YBR263W RPS28AQ3E7X9 67 aaPredicted RBP4.32□□□□□ -1.72
SHM1YBR263W TAR1Q8TGM6 124 aa4.32□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 83 ms