RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 CCDC6Q16204 474 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 TXNDC11Q6PKC3 985 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 CD300LGQ6UXG3 332 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 ALKAL1Q6UXT8 129 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 CAPN12Q6ZSI9 719 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 RUFY3Q7L099 469 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 MAEAQ7L5Y9 396 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 USP37Q86T82 979 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 BEST2Q8NFU1 509 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 SHKBP1Q8TBC3 707 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 GATA6Q92908 595 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 PSMG2Q969U7 264 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 ACDQ96AP0 544 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 ACAP3Q96P50 834 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 SCNM1Q9BWG6 230 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 CCDC113Q9H0I3 377 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 ATXN3LQ9H3M9 355 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 TASP1Q9H6P5 420 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 ZNF395Q9H8N7 513 aaPredicted RBP6.79□□□□□ -1.32
PRKCH-228ENST00000640011 KIF9Q9HAQ2 790 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 GOLGA2P5Q9HBQ8 144 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 GPRC5CQ9NQ84 441 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 GTSE1Q9NYZ3 720 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 CNTN3Q9P232 1028 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 EBF1Q9UH73 591 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 KCNG1Q9UIX4 513 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 KCNJ14Q9UNX9 436 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 WASF3Q9UPY6 502 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 YIPF1Q9Y548 306 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 SNX14Q9Y5W7 946 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 ZZEF1O43149 2961 aa6.79□□□□□ -1.32
PRKCH-228ENST00000640011 BCLAF3A2AJT9 711 aaKnown RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 I3L4J1 428 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TRDMT1O14717 391 aaKnown RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 XPOTO43592 962 aaKnown RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 EXTL3O43909 919 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 OAZ2O95190 189 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 APBB3O95704 486 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 MCF2P10911 925 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 GJA1P17302 382 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 LIG1P18858 919 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 DDX6P26196 483 aaKnown RBP eCLIP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 RPA1P27694 616 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 KRT2P35908 639 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TXKP42681 527 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TUFMP49411 452 aaKnown RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 RING1Q06587 406 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 SMARCB1Q12824 385 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 GPR17Q13304 367 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 RUNX3Q13761 415 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 HNRNPDQ14103 355 aaKnown RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 MYBPC2Q14324 1141 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 VEPH1Q14D04 833 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 ZNF568Q3ZCX4 644 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 USP39Q53GS9 565 aaKnown RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TMEM196Q5HYL7 178 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TBCELQ5QJ74 424 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 HAUS3Q68CZ6 603 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 SYT13Q7L8C5 426 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TAS1R3Q7RTX0 852 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TMC8Q8IU68 726 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 MEIOBQ8N635 442 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 ZCCHC14Q8WYQ9 949 aaKnown RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TBC1D32Q96NH3 1257 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TSPAN18Q96SJ8 248 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 POLR3CQ9BUI4 534 aaPredicted RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 MRPL4Q9BYD3 311 aaKnown RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 GZF1Q9H116 711 aaPredicted RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 DUSP15Q9H1R2 295 aaPredicted RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 TSPAN10Q9H1Z9 355 aaPredicted RBP6.78□□□□□ -1.32
PRKCH-228ENST00000640011 C17orf75Q9HAS0 396 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 PLEKHA5Q9HAU0 1116 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 MSRB2Q9Y3D2 182 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 CYP46A1Q9Y6A2 500 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 LAMA1P25391 3075 aa6.78□□□□□ -1.32
PRKCH-228ENST00000640011 COL4A2P08572 1712 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 LNP1A1A4G5 178 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 A6NJY4 79 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 M0QZQ0 153 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 NRG2O14511 850 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-228ENST00000640011 CYP3A5P20815 502 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 GABRR2P28476 465 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 GBP1P32455 592 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 AVPR1AP37288 418 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 PXNP49023 591 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-228ENST00000640011 SMTNP53814 917 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 SOX4Q06945 474 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-228ENST00000640011 DUSP4Q13115 394 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 CLN3Q13286 438 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 DMP1Q13316 513 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-228ENST00000640011 TOB2Q14106 344 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-228ENST00000640011 PDGFRLQ15198 375 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 TAF12Q16514 161 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 WDR44Q5JSH3 913 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 SPDYCQ5MJ68 293 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 GPR158Q5T848 1215 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 EEF1DP3Q658K8 133 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 LMBRD2Q68DH5 695 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-228ENST00000640011 ARMCX5Q6P1M9 558 aa6.77□□□□□ -1.33
PRKCH-228ENST00000640011 CC2D1AQ6P1N0 951 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms