RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 CYFIP2Q96F07 1278 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 TMEM169Q96HH4 297 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 PCDHB18PQ96TA0 734 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 HNRNPABQ99729 332 aaKnown RBP14.22□□□□□ -0.13
LINC00643-207ENST00000637212 RTP3Q9BQQ7 232 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 ZSWIM1Q9BR11 485 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 PLVAPQ9BX97 442 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 ISCUQ9H1K1 167 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 CHST7Q9NS84 486 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 SPTLC3Q9NUV7 552 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.22□□□□□ -0.13
LINC00643-207ENST00000637212 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.22□□□□□ -0.13
LINC00643-207ENST00000637212 CEP83Q9Y592 693 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 PCDHA11Q9Y5I1 949 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 LTBP2Q14767 1821 aa14.22□□□□□ -0.13
LINC00643-207ENST00000637212 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 H0YGN5 161 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 ZNF263O14978 683 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 TBC1D4O60343 1298 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 SOD2P04179 222 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 RB1P06400 928 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 LINC00271P0C7V0 271 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 UNGP13051 313 aaPredicted RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 TKTP29401 623 aaKnown RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 PBX3P40426 434 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 TSPY1Q01534 308 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 C1QBPQ07021 282 aaKnown RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 SMARCB1Q12824 385 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 INTS6LQ5JSJ4 861 aaKnown RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 VARS2Q5ST30 1063 aaKnown RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 TMEM173Q86WV6 379 aaPredicted RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 CEP57Q86XR8 500 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 DCP1BQ8IZD4 617 aaKnown RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 ANKRD52Q8NB46 1076 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 MYCBPAPQ8TBZ2 947 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 VCPIP1Q96JH7 1222 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 SYT15Q9BQS2 421 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 UBXN6Q9BZV1 441 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 DPEP3Q9H4B8 488 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 SEPT11Q9NVA2 429 aaKnown RBP14.21□□□□□ -0.13
LINC00643-207ENST00000637212 SSX2IPQ9Y2D8 614 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 PPP2R2CQ9Y2T4 447 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 BACE2Q9Y5Z0 518 aa14.21□□□□□ -0.13
LINC00643-207ENST00000637212 ATP8B3O60423 1300 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 ALPK3Q96L96 1907 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 ATP2C2O75185 946 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 MICAL2O94851 1124 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 CALCAP01258 141 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 FTLP02792 175 aaPredicted RBP14.2□□□□□ -0.14
LINC00643-207ENST00000637212 H2AFZP0C0S5 128 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 SETSIPP0DME0 302 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 CYP27A1Q02318 531 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 ORC1Q13415 861 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 CTXN3Q4LDR2 81 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 HABP4Q5JVS0 413 aaKnown RBP14.2□□□□□ -0.14
LINC00643-207ENST00000637212 PPP1R26Q5T8A7 1209 aaPredicted RBP14.2□□□□□ -0.14
LINC00643-207ENST00000637212 KIAA0319Q5VV43 1072 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 ZNF280DQ6N043 979 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 H2AFVQ71UI9 128 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 TAS1R1Q7RTX1 841 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 PHF13Q86YI8 300 aaPredicted RBP14.2□□□□□ -0.14
LINC00643-207ENST00000637212 WDTC1Q8N5D0 677 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 C12orf29Q8N999 325 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 STK32AQ8WU08 396 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 PIK3R5Q8WYR1 880 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 SAMD11Q96NU1 681 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 PKMYT1Q99640 499 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 HERC2P3Q9BVR0 1158 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 ZCWPW1Q9H0M4 648 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 CRTAC1Q9NQ79 661 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 HESX1Q9UBX0 185 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 LZTS1Q9Y250 596 aa14.2□□□□□ -0.14
LINC00643-207ENST00000637212 REXO2Q9Y3B8 237 aaKnown RBP14.2□□□□□ -0.14
LINC00643-207ENST00000637212 MICAL3Q7RTP6 2002 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 MYBPHLA2RUH7 354 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 GOLGA6L9A6NEM1 432 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 PJA2O43164 708 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 FGF18O76093 207 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 CFHP08603 1231 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 ACAT1P24752 427 aaKnown RBP14.19□□□□□ -0.14
LINC00643-207ENST00000637212 GPD2P43304 727 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 VAV2P52735 878 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 SLC8A3P57103 927 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 SNX16P57768 344 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 DSG1Q02413 1049 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 CENPCQ03188 943 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 NFE2Q16621 373 aaPredicted RBP14.19□□□□□ -0.14
LINC00643-207ENST00000637212 PKDCCQ504Y2 493 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 KIAA1841Q6NSI8 718 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 DENND1BQ6P3S1 775 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 CCAR2Q8N163 923 aaKnown RBP14.19□□□□□ -0.14
LINC00643-207ENST00000637212 TRIM11Q96F44 468 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 VN1R3Q9BXE9 311 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 DUSP16Q9BY84 665 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 B3GNT5Q9BYG0 378 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 MIS12Q9H081 205 aa14.19□□□□□ -0.14
LINC00643-207ENST00000637212 COL4A6Q14031 1691 aa14.18□□□□□ -0.14
LINC00643-207ENST00000637212 LINC01553A4QN01 128 aa14.18□□□□□ -0.14
LINC00643-207ENST00000637212 ANKRD62A6NC57 917 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms