RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-225	ENST00000636861	MIGA2	Q7L4E1	593 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	HAUS6	Q7Z4H7	955 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	ZNF804A	Q7Z570	1209 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	RIC3	Q7Z5B4	369 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	ZNF598	Q86UK7	904 aa	Known RBP	4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	TREML1	Q86YW5	311 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	ANKRD13A	Q8IZ07	590 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	SLC7A5P1	Q8MH63	180 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	SRBD1	Q8N5C6	995 aa	Known RBP	4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	ESX1	Q8N693	406 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	GOLM1	Q8NBJ4	401 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	PDPR	Q8NCN5	879 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	OR2W6P	Q8NHA6	318 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	ANGPTL6	Q8NI99	470 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	ZNF507	Q8TCN5	953 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	PXYLP1	Q8TE99	480 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	NECTIN2	Q92692	538 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	RNF25	Q96BH1	459 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	NMD3	Q96D46	503 aa	Known RBP	4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	PAGE5	Q96GU1	130 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	CEP19	Q96LK0	163 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	FERMT1	Q9BQL6	677 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	TUBGCP2	Q9BSJ2	902 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	NOC4L	Q9BVI4	516 aa	Known RBP	4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	PLVAP	Q9BX97	442 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	OSBPL8	Q9BZF1	889 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	MYLK2	Q9H1R3	596 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	ZNF696	Q9H7X3	374 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	DBNDD1	Q9H9R9	158 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	C12orf10	Q9HB07	376 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	VTA1	Q9NP79	307 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	PDLIM7	Q9NR12	457 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	VPS45	Q9NRW7	570 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	KRT82	Q9NSB4	513 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	SELENON	Q9NZV5	590 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	HSFX1	Q9UBD0	423 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	KLHL3	Q9UH77	587 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	RAB26	Q9ULW5	256 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	JAG2	Q9Y219	1238 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	DAGLA	Q9Y4D2	1042 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	AP4S1	Q9Y587	144 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	ECM29	Q5VYK3	1845 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	CSMD1	Q96PZ7	3565 aa		4.22	□□□□□ -1.73
CHD2-225	ENST00000636861	ABCA2	Q9BZC7	2435 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	LRRK2	Q5S007	2527 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861		A0A1W2PRG0	241 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	TLDC2	A0PJX2	215 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	TMEM120B	A0PK00	339 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	UNCX	A6NJT0	531 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	NOTO	A8MTQ0	251 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	EVPLL	A8MZ36	301 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	KIF28P	B7ZC32	967 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	BACH1	O14867	736 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	ALOX15B	O15296	676 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	MAP3K13	O43283	966 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	GALR2	O43603	387 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	PDE8A	O60658	829 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	CDH16	O75309	829 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	GUCY1B2	O75343	617 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	ENTPD5	O75356	428 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	TCEA3	O75764	348 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	PALM	O75781	387 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	TSPAN9	O75954	239 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	KRT36	O76013	467 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	DEXI	O95424	95 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	ABL1	P00519	1130 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	MMP1	P03956	469 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	RPN1	P04843	607 aa	Known RBP	4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	PROS1	P07225	676 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	ESRRA	P11474	423 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	FDPS	P14324	419 aa	Known RBP	4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	ETS2	P15036	469 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	BRAF	P15056	766 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	ANPEP	P15144	967 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	GNA11	P29992	359 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	CHRNA3	P32297	505 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	CXCR5	P32302	372 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	GTF2H1	P32780	548 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	EIF4A3	P38919	411 aa	Known RBP	4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	PHKA2	P46019	1235 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	TRAPPC10	P48553	1259 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	CDK9	P50750	372 aa	Known RBP	4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	EMP3	P54852	163 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	NPEPPS	P55786	919 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	PTEN	P60484	403 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	FCHO2	Q0JRZ9	810 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	HSPA14	Q0VDF9	509 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	TEF	Q10587	303 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	KCNMA1	Q12791	1236 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	PDK3	Q15120	406 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	FXN	Q16595	210 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	MAN2A1	Q16706	1144 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	PTPN21	Q16825	1174 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	EDRF1	Q3B7T1	1238 aa		4.21	□□□□□ -1.74
CHD2-225	ENST00000636861	WDR72	Q3MJ13	1102 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms