RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 SEMA4DQ92854 862 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 HSMCR30P0CW71 290 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 ZFXP17010 805 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 TAF13Q15543 124 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 FAM71DQ8N9W8 422 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 DCP1AQ9NPI6 582 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 ERVV-1B6SEH8 477 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 RANBP1P43487 201 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 SGCGQ13326 291 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 CTXN3Q4LDR2 81 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 MTSS1LQ765P7 747 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 DNAJC1Q96KC8 554 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 ADAM21Q9UKJ8 722 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 RAG1P15918 1043 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 CNGA2Q16280 664 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 FAR2Q96K12 515 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 ZNRF3Q9ULT6 936 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 MFAP3LO75121 409 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 CETPP11597 493 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 CNTN1Q12860 1018 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 NDEL1Q9GZM8 345 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 PLA2G4CQ9UP65 541 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 SPACA6W5XKT8 324 aa18.57■□□□□ 0.56
CACNA1A-227ENST00000636549 F5H5T6 163 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 PALB2Q86YC2 1186 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 VSTM4Q8IW00 320 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 STRBPQ96SI9 672 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 CEP41Q9BYV8 373 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 TRIM25Q14258 630 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 INPP5AQ14642 412 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 RSPH1Q8WYR4 309 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 GPATCH2LQ9NWQ4 482 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 GALNT8Q9NY28 637 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 ODC1P11926 461 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 CYP51A1Q16850 503 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 CERS4Q9HA82 394 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 NARFQ9UHQ1 456 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 KLK7P49862 253 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 HDDC2Q7Z4H3 204 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 OSBPL6Q9BZF3 934 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 TRMT6Q9UJA5 497 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 PDZK1P1A8MUH7 402 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 AP1G2O75843 785 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 RESP18Q5W5W9 173 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 COLEC11Q9BWP8 271 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 UGGT1Q9NYU2 1555 aa18.56■□□□□ 0.56
CACNA1A-227ENST00000636549 S100A5P33763 92 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 PGM1P36871 562 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 RGS4P49798 205 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 HIRAP54198 1017 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 BRINP3Q76B58 766 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 DPP3Q9NY33 737 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 RAB23Q9ULC3 237 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 RUVBL2Q9Y230 463 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 SERPINB5P36952 375 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 TFAP2DQ7Z6R9 452 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 RBBP8NLQ8NC74 664 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 MRPL1Q9BYD6 325 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 ROGDIQ9GZN7 287 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 LOC100653049A0A140TA62 436 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 KRT34O76011 436 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 ACO1P21399 889 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 EPHA10Q5JZY3 1008 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 SLC35G2Q8TBE7 412 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 MRPS31Q92665 395 aaKnown RBP18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 ATXN3LQ9H3M9 355 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 SOX13Q9UN79 622 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 TOMM70O94826 608 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 ZSWIM2Q8NEG5 633 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 HPDLQ96IR7 371 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 PLXNC1O60486 1568 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 PEX1O43933 1283 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 HALP42357 657 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 NCKAP1LP55160 1127 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 GPAT2Q6NUI2 795 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 MMGT1Q8N4V1 131 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 OSBPL9Q96SU4 736 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 ETNK1Q9HBU6 452 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 PCDHB12Q9Y5F1 795 aa18.55■□□□□ 0.56
CACNA1A-227ENST00000636549 MT-CO1P00395 513 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 FAM200BP0CF97 657 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 CYP19A1P11511 503 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 EPHB2P29323 1055 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 NOS3P29474 1203 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 KIAA1324Q6UXG2 1013 aaKnown RBP18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 LONP2Q86WA8 852 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 TRPC4APQ8TEL6 797 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 PKD2L2Q9NZM6 624 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 CFAP99D6REC4 459 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 ZNF682O95780 498 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 APOA1P02647 267 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 VCLP18206 1134 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 CLCN6P51797 869 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 HIC1Q14526 733 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 NANOGNBQ7Z5D8 188 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 GPRASP2Q96D09 838 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 ECSITQ9BQ95 431 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 EPN3Q9H201 632 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 KLHL1Q9NR64 748 aa18.54■□□□□ 0.56
CACNA1A-227ENST00000636549 SLC12A8A0AV02 714 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms