RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 VCX3AQ9NNX9 186 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 PRR12Q9ULL5 1215 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 SLC4A7Q9Y6M7 1214 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 H3BRJ5 948 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 PDLIM1O00151 329 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 IPO5O00410 1097 aaKnown RBP14.82□□□□□ -0.04
LDB3-209ENST00000623056 RIMBP2O15034 1052 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 DHRS4L1P0CG22 281 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 TCF4P15884 667 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 BGNP21810 368 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 DSG3P32926 999 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 ERFP50548 548 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 GCNT1Q02742 428 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 MSS51Q4VC12 460 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 ZFYVE27Q5T4F4 411 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 LIN9Q5TKA1 542 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 APOBEC3HQ6NTF7 200 aaKnown RBP14.82□□□□□ -0.04
LDB3-209ENST00000623056 MFSD7Q6UXD7 560 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 RIPOR1Q6ZS17 1223 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 NET1Q7Z628 596 aaPredicted RBP14.82□□□□□ -0.04
LDB3-209ENST00000623056 CHSY1Q86X52 802 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 ATP11CQ8NB49 1132 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 PANX3Q96QZ0 392 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 DRG1Q9Y295 367 aaKnown RBP14.82□□□□□ -0.04
LDB3-209ENST00000623056 PCDHB2Q9Y5E7 798 aa14.82□□□□□ -0.04
LDB3-209ENST00000623056 FAM237BA0A1B0GVD1 139 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 LPXNO60711 386 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 IFNB1P01574 187 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 CFHP08603 1231 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 CRABP2P29373 138 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 VCPP55072 806 aaKnown RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 PEX3P56589 373 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 TCP10Q12799 353 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 OASLQ15646 514 aaKnown RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 KLHL38Q2WGJ6 581 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 CRY2Q49AN0 593 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 C3orf62Q6ZUJ4 267 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 ZNF677Q86XU0 584 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 MYLK4Q86YV6 388 aaPredicted RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 TMPRSS6Q8IU80 811 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 RCOR2Q8IZ40 523 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 HAUS1Q96CS2 278 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 OPTNQ96CV9 577 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 FAM84AQ96KN4 292 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 FAM111AQ96PZ2 611 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 SH2D3AQ9BRG2 576 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 CENPKQ9BS16 269 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 TMEM121Q9BTD3 319 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 MRPL47Q9HD33 250 aaKnown RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 KCNQ5Q9NR82 932 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 NDE1Q9NXR1 346 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 SIPA1L1O43166 1804 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 DDTLA6NHG4 134 aaPredicted RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 SGK1O00141 431 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 TLR3O15455 904 aaKnown RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 CREB3O43889 395 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 RNASEH1O60930 286 aaKnown RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 GDF11O95390 407 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 KRT1P04264 644 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 ENO1P06733 434 aaKnown RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 POLR2MP0CAP2 368 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 ETV4P43268 484 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 RARRES1P49788 294 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 CACNB3P54284 484 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 CDC16Q13042 620 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 FNBP1LQ5T0N5 605 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 ENOSF1Q7L5Y1 443 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 TREML1Q86YW5 311 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 PASD1Q8IV76 773 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 SCUBE1Q8IWY4 988 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 RBM15BQ8NDT2 890 aaKnown RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 POMGNT1Q8WZA1 660 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 TTC17Q96AE7 1141 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 CLPTM1LQ96KA5 538 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 WDR83Q9BRX9 315 aaKnown RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 ST6GALNAC4Q9H4F1 302 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 PCDH9Q9HC56 1237 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 GPRC5CQ9NQ84 441 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
LDB3-209ENST00000623056 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
LDB3-209ENST00000623056 CAPN14A8MX76 684 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 CIB2O75838 187 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 USP1O94782 785 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 MT-ND3P03897 115 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 ACTR3P61158 418 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 AP2B1P63010 937 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 TRMT5Q32P41 509 aaKnown RBP14.8□□□□□ -0.04
LDB3-209ENST00000623056 ANKRD22Q5VYY1 191 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 PLEKHA7Q6IQ23 1121 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 CCDC174Q6PII3 467 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 TMEM179Q6ZVK1 233 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 MIER3Q7Z3K6 550 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 SMC1BQ8NDV3 1235 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 TMC2Q8TDI7 906 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 TTC1Q99614 292 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 ZWILCHQ9H900 591 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 PKD2L1Q9P0L9 805 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 PLA2G4CQ9UP65 541 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 ZHX2Q9Y6X8 837 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 QSER1Q2KHR3 1735 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms