RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 GAB3Q8WWW8 586 aa11.83□□□□□ -0.52
LINC00963-214ENST00000622680 RAD54LQ92698 747 aa11.83□□□□□ -0.52
LINC00963-214ENST00000622680 KCNN1Q92952 543 aa11.83□□□□□ -0.52
LINC00963-214ENST00000622680 USP13Q92995 863 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-214ENST00000622680 CALML4Q96GE6 196 aa11.83□□□□□ -0.52
LINC00963-214ENST00000622680 HHIPQ96QV1 700 aa11.83□□□□□ -0.52
LINC00963-214ENST00000622680 DPP3Q9NY33 737 aa11.83□□□□□ -0.52
LINC00963-214ENST00000622680 MAGED2Q9UNF1 606 aaPredicted RBP11.83□□□□□ -0.52
LINC00963-214ENST00000622680 NBEAQ8NFP9 2946 aa11.83□□□□□ -0.52
LINC00963-214ENST00000622680 H3BQV1 296 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 TULP1O00294 542 aaPredicted RBP11.82□□□□□ -0.52
LINC00963-214ENST00000622680 RNF40O75150 1001 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 TADA3O75528 432 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 EPN2O95208 641 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 EGFP01133 1207 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 CCDC192P0DO97 292 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 HAPLN1P10915 354 aaPredicted RBP11.82□□□□□ -0.52
LINC00963-214ENST00000622680 HMGA1P17096 107 aaKnown RBP11.82□□□□□ -0.52
LINC00963-214ENST00000622680 WEE1P30291 646 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 AVPR1AP37288 418 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 UBA7P41226 1012 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 TUFMP49411 452 aaKnown RBP11.82□□□□□ -0.52
LINC00963-214ENST00000622680 GTF2BQ00403 316 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 BFSP1Q12934 665 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 RUNX3Q13761 415 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 TMEM196Q5HYL7 178 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 SCARA3Q6AZY7 606 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 IL31Q6EBC2 164 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 TCEAL6Q6IPX3 200 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 METTL23Q86XA0 190 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 SFR1Q86XK3 245 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 SYNPOQ8N3V7 929 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 KCTD17Q8N5Z5 321 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 C12orf50Q8NA57 414 aaPredicted RBP11.82□□□□□ -0.52
LINC00963-214ENST00000622680 SPPL2BQ8TCT7 592 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 TCEAL3Q969E4 200 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 TSPAN18Q96SJ8 248 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 FAM83CQ9BQN1 747 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 PI4K2AQ9BTU6 479 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 FBRSL1Q9HCM7 1045 aaKnown RBP11.82□□□□□ -0.52
LINC00963-214ENST00000622680 THG1LQ9NWX6 298 aaKnown RBP11.82□□□□□ -0.52
LINC00963-214ENST00000622680 AGO2Q9UKV8 859 aaKnown RBP11.82□□□□□ -0.52
LINC00963-214ENST00000622680 DSEQ9UL01 958 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 DERAQ9Y315 318 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 C2CD2Q9Y426 696 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 KIF3AQ9Y496 699 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 PKD1L2Q7Z442 2459 aa11.82□□□□□ -0.52
LINC00963-214ENST00000622680 DMXL2Q8TDJ6 3036 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 HCRTO43612 131 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 F11P03951 625 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 ACAT1P24752 427 aaKnown RBP11.81□□□□□ -0.52
LINC00963-214ENST00000622680 HOXA6P31267 233 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 RAP1GAPP47736 663 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 SV2CQ496J9 727 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 C8orf34Q49A92 452 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 CRELD2Q6UXH1 353 aaPredicted RBP11.81□□□□□ -0.52
LINC00963-214ENST00000622680 THEM5Q8N1Q8 247 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 C2orf15Q8WU43 125 aaKnown RBP11.81□□□□□ -0.52
LINC00963-214ENST00000622680 LARP4BQ92615 738 aaKnown RBP11.81□□□□□ -0.52
LINC00963-214ENST00000622680 CHAMP1Q96JM3 812 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 AK8Q96MA6 479 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 SLC22A12Q96S37 553 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 CCSER1Q9C0I3 900 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 ASB7Q9H672 318 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 SLC8A2Q9UPR5 921 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 PCDHB5Q9Y5E4 795 aa11.81□□□□□ -0.52
LINC00963-214ENST00000622680 ANKRD11Q6UB99 2663 aaPredicted RBP11.81□□□□□ -0.52
LINC00963-214ENST00000622680 KPNA7A9QM74 516 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 TRDMT1O14717 391 aaKnown RBP11.8□□□□□ -0.52
LINC00963-214ENST00000622680 PRPF40AO75400 957 aaKnown RBP11.8□□□□□ -0.52
LINC00963-214ENST00000622680 ZNF806P0C7X5 589 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 POLR2BP30876 1174 aaKnown RBP11.8□□□□□ -0.52
LINC00963-214ENST00000622680 MPLP40238 635 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 TSPY1Q01534 308 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 KCNA1Q09470 495 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 GRSF1Q12849 480 aaKnown RBP eCLIP11.8□□□□□ -0.52
LINC00963-214ENST00000622680 N4BP2L1Q5TBK1 243 aaPredicted RBP11.8□□□□□ -0.52
LINC00963-214ENST00000622680 DYMQ7RTS9 669 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 CACNA2D4Q7Z3S7 1137 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 DCP1BQ8IZD4 617 aaKnown RBP11.8□□□□□ -0.52
LINC00963-214ENST00000622680 PDCL2Q8N4E4 241 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 RPLP0P6Q8NHW5 317 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 POMGNT1Q8WZA1 660 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 EZH1Q92800 747 aaPredicted RBP11.8□□□□□ -0.52
LINC00963-214ENST00000622680 SAAL1Q96ER3 474 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 TMX3Q96JJ7 454 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 ZNF560Q96MR9 790 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 KIF9Q9HAQ2 790 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 TRPC7Q9HCX4 862 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 TDP1Q9NUW8 608 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 TBC1D7Q9P0N9 293 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 L1RE1Q9UN81 338 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 STYXL1Q9Y6J8 313 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 TMEM131Q92545 1883 aa11.8□□□□□ -0.52
LINC00963-214ENST00000622680 ATRXP46100 2492 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 DCLK1O15075 740 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 SLC26A4O43511 780 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 PPP1R37O75864 691 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 ITGB3P05106 788 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 SCP2P22307 547 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms