RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 FAM171BQ6P995 826 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 UNC93AQ86WB7 457 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 TTC39CQ8N584 583 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 CMASQ8NFW8 434 aaPredicted RBP19.82■□□□□ 0.76
CIRBP-245ENST00000621399 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.82■□□□□ 0.76
CIRBP-245ENST00000621399 TNIP3Q96KP6 325 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 PKMYT1Q99640 499 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 ARID3AQ99856 593 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 HSD3B7Q9H2F3 369 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 DPEP3Q9H4B8 488 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 CRTAC1Q9NQ79 661 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 ABI2Q9NYB9 513 aaPredicted RBP19.82■□□□□ 0.76
CIRBP-245ENST00000621399 LIMA1Q9UHB6 759 aaKnown RBP19.82■□□□□ 0.76
CIRBP-245ENST00000621399 INSL5Q9Y5Q6 135 aa19.82■□□□□ 0.76
CIRBP-245ENST00000621399 LRG1P02750 347 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 TRIM21P19474 475 aaKnown RBP19.81■□□□□ 0.76
CIRBP-245ENST00000621399 SLC9A1P19634 815 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 TBXAS1P24557 533 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-245ENST00000621399 INCA1Q0VD86 236 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 SMAD4Q13485 552 aaKnown RBP19.81■□□□□ 0.76
CIRBP-245ENST00000621399 EXOC3L4Q17RC7 722 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 CCDC142Q17RM4 750 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 MDH1BQ5I0G3 518 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 ATAT1Q5SQI0 421 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 PTCRAQ6ISU1 281 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-245ENST00000621399 LRSAM1Q6UWE0 723 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 GPR149Q86SP6 731 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 SPATA2LQ8IUW3 424 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-245ENST00000621399 PPM1KQ8N3J5 372 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 MYCBPAPQ8TBZ2 947 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 SPPL2BQ8TCT7 592 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 PRKD2Q9BZL6 878 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 DNAI2Q9GZS0 605 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 CRISPLD1Q9H336 500 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 PIDD1Q9HB75 910 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 CISHQ9NSE2 258 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 HMGXB4Q9UGU5 601 aa19.81■□□□□ 0.76
CIRBP-245ENST00000621399 USP15Q9Y4E8 981 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-245ENST00000621399 PLXNA3P51805 1871 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 GRXCR2A6NFK2 248 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 CCL16O15467 120 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 MBTPS2O43462 519 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 XYLBO75191 536 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 ATP1A3P13637 1013 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 HOXA9P31269 272 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 TUFMP49411 452 aaKnown RBP19.8■□□□□ 0.76
CIRBP-245ENST00000621399 COPB1P53618 953 aaKnown RBP19.8■□□□□ 0.76
CIRBP-245ENST00000621399 YWHAEP62258 255 aaKnown RBP19.8■□□□□ 0.76
CIRBP-245ENST00000621399 TPM4P67936 248 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 CYP27A1Q02318 531 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 ORC1Q13415 861 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 MGAT5BQ3V5L5 792 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 TRIM65Q6PJ69 517 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 CYP26C1Q6V0L0 522 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 C4orf50Q6ZRC1 276 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 RRAGAQ7L523 313 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 ACOT1Q86TX2 421 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 LUZP1Q86V48 1076 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 ARHGEF19Q8IW93 802 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.8■□□□□ 0.76
CIRBP-245ENST00000621399 TTC9BQ8N6N2 239 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 B3GALNT2Q8NCR0 500 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 SMG7Q92540 1137 aaKnown RBP19.8■□□□□ 0.76
CIRBP-245ENST00000621399 MYLPFQ96A32 169 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 ZNF707Q96C28 371 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-245ENST00000621399 ASB2Q96Q27 587 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 SEPT5Q99719 369 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-245ENST00000621399 LPIN3Q9BQK8 851 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 NT5C1AQ9BXI3 368 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 TSPY26PQ9H489 355 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 FAM124BQ9H5Z6 455 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-245ENST00000621399 HSFX1Q9UBD0 423 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 FAM50BQ9Y247 325 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 YIPF1Q9Y548 306 aa19.8■□□□□ 0.76
CIRBP-245ENST00000621399 SPTBN5Q9NRC6 3674 aaKnown RBP19.79■□□□□ 0.76
CIRBP-245ENST00000621399 BRWD1Q9NSI6 2320 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 CILPO75339 1184 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 PON1P27169 355 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 ALDH1A3P47895 512 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 KCNQ1P51787 676 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 TWF1Q12792 350 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 FKBP15Q5T1M5 1219 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 PHLDB3Q6NSJ2 640 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 CRYBG2Q8N1P7 616 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 FEZF2Q8TBJ5 459 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 FAM200AQ8TCP9 573 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 WHAMMQ8TF30 809 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 PCED1BQ96HM7 432 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 RIPOR3Q96MK2 946 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 ABCB6Q9NP58 842 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 UBE2TQ9NPD8 197 aaPredicted RBP19.79■□□□□ 0.76
CIRBP-245ENST00000621399 CDH22Q9UJ99 828 aa19.79■□□□□ 0.76
CIRBP-245ENST00000621399 LRRC10BA6NIK2 292 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 GOLGA6L19H0YKK7 550 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 SOAT2O75908 522 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 HAPLN1P10915 354 aaPredicted RBP19.78■□□□□ 0.76
CIRBP-245ENST00000621399 CYP2F1P24903 491 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 MTHFRP42898 656 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 GCNT1Q02742 428 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 PLD1Q13393 1074 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms