RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 MTHFD1LQ6UB35 978 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.39□□□□□ -1.07
CBWD1-228ENST00000619157 NEK8Q86SG6 692 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 DIS3L2Q8IYB7 885 aaKnown RBP8.39□□□□□ -1.07
CBWD1-228ENST00000619157 LINC01465Q8N7H1 131 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 ATP8B4Q8TF62 1192 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 CEP89Q96ST8 783 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 RIT2Q99578 217 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 CDX2Q99626 313 aaPredicted RBP8.39□□□□□ -1.07
CBWD1-228ENST00000619157 FTOQ9C0B1 505 aaKnown RBP eCLIP8.39□□□□□ -1.07
CBWD1-228ENST00000619157 NKX2-4Q9H2Z4 354 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 RXFP1Q9HBX9 757 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 ZNF302Q9NR11 478 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 SMPD4Q9NXE4 827 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 WRAP73Q9P2S5 460 aaPredicted RBP8.39□□□□□ -1.07
CBWD1-228ENST00000619157 GABBR1Q9UBS5 961 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 DDX25Q9UHL0 483 aaKnown RBP8.39□□□□□ -1.07
CBWD1-228ENST00000619157 PCDHA10Q9Y5I2 948 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 COL4A6Q14031 1691 aa8.39□□□□□ -1.07
CBWD1-228ENST00000619157 CCDC194A0A1B0GVG4 234 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.38□□□□□ -1.07
CBWD1-228ENST00000619157 SH3D21A4FU49 640 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 H0Y8X5 98 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 GAS7O60861 476 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 CAND2O75155 1236 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 BAIAP3O94812 1187 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 C22orf31O95567 290 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 GSNP06396 782 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 GNAT1P11488 350 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 NME1P15531 152 aaKnown RBP8.38□□□□□ -1.07
CBWD1-228ENST00000619157 ATP2A2P16615 1042 aaKnown RBP8.38□□□□□ -1.07
CBWD1-228ENST00000619157 KRT2P35908 639 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 EIF4A3P38919 411 aaKnown RBP8.38□□□□□ -1.07
CBWD1-228ENST00000619157 LPIN1Q14693 890 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 RABEP1Q15276 862 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 LRCH2Q5VUJ6 765 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 MIS18BP1Q6P0N0 1132 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 HERC6Q8IVU3 1022 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 SMAP1Q8IYB5 467 aaPredicted RBP8.38□□□□□ -1.07
CBWD1-228ENST00000619157 TIFAQ96CG3 184 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 TEKT3Q9BXF9 490 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 AZI2Q9H6S1 392 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 AGO3Q9H9G7 860 aaKnown RBP8.38□□□□□ -1.07
CBWD1-228ENST00000619157 DBR1Q9UK59 544 aaKnown RBP8.38□□□□□ -1.07
CBWD1-228ENST00000619157 PCDHA2Q9Y5H9 948 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 CDY2AQ9Y6F7 541 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 SLC4A7Q9Y6M7 1214 aa8.38□□□□□ -1.07
CBWD1-228ENST00000619157 MUC3AQ02505 3323 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 SMIM35A0A1B0GVV1 85 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 EPOPA6NHQ4 379 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 RRN3P2A6NIE6 340 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 C9IYK1 514 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 MATN3O15232 486 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 HBP1O60381 514 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 CCNT1O60563 726 aaKnown RBP8.37□□□□□ -1.07
CBWD1-228ENST00000619157 GREM1O60565 184 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 CA3P07451 260 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 GHRP10912 638 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 KLRC1P26715 233 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 MCM4P33991 863 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 SLC26A2P50443 739 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 MRPS6P82932 125 aaKnown RBP8.37□□□□□ -1.07
CBWD1-228ENST00000619157 PRKCEQ02156 737 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 DRP2Q13474 957 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 FBXO47Q5MNV8 452 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 FAM160B1Q5W0V3 765 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 TAF2Q6P1X5 1199 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 ERMP1Q7Z2K6 904 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 TRMT1LQ7Z2T5 733 aaKnown RBP8.37□□□□□ -1.07
CBWD1-228ENST00000619157 RTN4RL1Q86UN2 441 aaPredicted RBP8.37□□□□□ -1.07
CBWD1-228ENST00000619157 KIAA0319LQ8IZA0 1049 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 CARFQ8N187 725 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 WASF1Q92558 559 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 TMX3Q96JJ7 454 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 ZSCAN31Q96LW9 406 aaPredicted RBP8.37□□□□□ -1.07
CBWD1-228ENST00000619157 SLC9A7Q96T83 725 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 SH2D3AQ9BRG2 576 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 LLPHQ9BRT6 129 aaKnown RBP8.37□□□□□ -1.07
CBWD1-228ENST00000619157 FAM49AQ9H0Q0 323 aaPredicted RBP8.37□□□□□ -1.07
CBWD1-228ENST00000619157 TMEM60Q9H2L4 133 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 UBP1Q9NZI7 540 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 STXBP5LQ9Y2K9 1186 aa8.37□□□□□ -1.07
CBWD1-228ENST00000619157 COL1A2P08123 1366 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 SHOXO15266 292 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 NOBOXO60393 691 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 GJB5O95377 273 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 PARNO95453 639 aaKnown RBP8.36□□□□□ -1.07
CBWD1-228ENST00000619157 ASGR2P07307 311 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 ACTN1P12814 892 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 GCFC2P16383 781 aaKnown RBP8.36□□□□□ -1.07
CBWD1-228ENST00000619157 XBP1P17861 261 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 CD52P31358 61 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 JAK3P52333 1124 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 PPP2R5CQ13362 524 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 RAB30Q15771 203 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 ZNF484Q5JVG2 852 aa8.36□□□□□ -1.07
CBWD1-228ENST00000619157 TDRD10Q5VZ19 366 aaKnown RBP8.36□□□□□ -1.07
CBWD1-228ENST00000619157 CWF19L1Q69YN2 538 aaKnown RBP8.36□□□□□ -1.07
CBWD1-228ENST00000619157 ANO5Q75V66 913 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms