RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 OR10T2Q8NGX3 314 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 LMO3Q8TAP4 145 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 KBTBD7Q8WVZ9 684 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 TATDN2Q93075 761 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 E2F7Q96AV8 911 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 HPDLQ96IR7 371 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 ANKRD36BP1Q96IX9 119 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 CEP63Q96MT8 703 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 FNBP1Q96RU3 617 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 LPIN3Q9BQK8 851 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 MRPL45Q9BRJ2 306 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 PI4K2AQ9BTU6 479 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 PRKD2Q9BZL6 878 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 GPR88Q9GZN0 384 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 DNAI2Q9GZS0 605 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 ZMYND15Q9H091 742 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 IGFLR1Q9H665 355 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 WDR6Q9NNW5 1121 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 SAMSN1Q9NSI8 373 aaKnown RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 GDE1Q9NZC3 331 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 MTRRQ9UBK8 725 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 CDH22Q9UJ99 828 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 ITGA11Q9UKX5 1188 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 PCDHB8Q9UN66 801 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 FRMD4BQ9Y2L6 1034 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 USP15Q9Y4E8 981 aaPredicted RBP5.62□□□□□ -1.51
SHMT1-211ENST00000618902 ASB3Q9Y575 518 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 NUB1Q9Y5A7 615 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 CLUHO75153 1309 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 TSC2P49815 1807 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 PLXNA3P51805 1871 aa5.62□□□□□ -1.51
SHMT1-211ENST00000618902 BICDL2A1A5D9 508 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 LRRC10BA6NIK2 292 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 EFCAB8A8MWE9 144 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CYB561D2O14569 222 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF197O14709 1029 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ZMYND10O75800 440 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ABLIM3O94929 683 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ASS1P00966 412 aaKnown RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 SERPINC1P01008 464 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 TNNC2P02585 160 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CYP11A1P05108 521 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 KRT19P08727 400 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 OR4Q2P0C623 313 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 SPATA31D3P0C874 917 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ODC1P11926 461 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 F5P12259 2224 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ATP1A3P13637 1013 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ATF2P15336 505 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF18P17022 549 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 TRIM21P19474 475 aaKnown RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 LMO2P25791 158 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ELF1P32519 619 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 SSTR3P32745 418 aaPredicted RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 RAP1GAPP47736 663 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 TUFMP49411 452 aaKnown RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 TAF6P49848 677 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 KCNQ1P51787 676 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CDH8P55286 799 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CCZ1BP86790 482 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CCZ1P86791 482 aaPredicted RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 FANCCQ00597 558 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 YWHAHQ04917 246 aaPredicted RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 MTMR3Q13615 1198 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 NCOA4Q13772 614 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 PSMD5Q16401 504 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 SOWAHAQ2M3V2 549 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 MIIPQ5JXC2 388 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 TMEM31Q5JXX7 168 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CDKAL1Q5VV42 579 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF280DQ6N043 979 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 SYCE2Q6PIF2 218 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 EP400NLQ6ZTU2 488 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 SPATA31D4Q6ZUB0 917 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 FRMD5Q7Z6J6 570 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 LRRTM3Q86VH5 581 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CEP57Q86XR8 500 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 GLYCTKQ8IVS8 523 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 TCEAL8Q8IYN2 117 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ELMOD1Q8N336 334 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 C12orf76Q8N812 135 aaPredicted RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 KIAA1958Q8N8K9 716 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ANKRD20A12PQ8NF67 263 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 EDAQ92838 391 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 IQCDQ96DY2 449 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CNOT6LQ96LI5 555 aaKnown RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF560Q96MR9 790 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 PKMYT1Q99640 499 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CRISPLD1Q9H336 500 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 SMYD3Q9H7B4 428 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 MMRN2Q9H8L6 949 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 VRTNQ9H8Y1 702 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 TMEM8AQ9HCN3 771 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 TMLHEQ9NVH6 421 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 FANCLQ9NW38 375 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 GDAP2Q9NXN4 497 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 EHD2Q9NZN4 543 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 EPS15L1Q9UBC2 864 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 MYO1AQ9UBC5 1043 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 HMGXB4Q9UGU5 601 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms