RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 GLT1D1Q96MS3 346 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 OSBPL5Q9H0X9 879 aaPredicted RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 GRID1Q9ULK0 1009 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 MTO1Q9Y2Z2 717 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 TULP4Q9NRJ4 1543 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 NPHP3-ACAD11A0A0J9YXS1 232 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 TTLL13PA6NNM8 815 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 MDH1BQ5I0G3 518 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 SLC25A41Q8N5S1 370 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 SPATA4Q8NEY3 305 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 CRAMP1Q96RY5 1269 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 DSEQ9UL01 958 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 PCDHB2Q9Y5E7 798 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 HOXA2O43364 376 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 BMP10O95393 424 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 RRM2P31350 389 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 FRMD8Q9BZ67 464 aaPredicted RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 GEMIN8Q9NWZ8 242 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 H0YC42 278 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 GPR182O15218 404 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 WBP4O75554 376 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 RBBP8NLQ8NC74 664 aaPredicted RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 GJD4Q96KN9 370 aaPredicted RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 XPO6Q96QU8 1125 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 MTMR4Q9NYA4 1195 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 RNF112Q9ULX5 631 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 SYNCRIPO60506 623 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 RHOBTB1O94844 696 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 ASS1P00966 412 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 CYP2C9P11712 490 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 PSMA4P25789 261 aaKnown RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 KRT20P35900 424 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 TIGD7Q6NT04 549 aaPredicted RBP11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 P3H2Q8IVL5 708 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 UNC45BQ8IWX7 931 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 MMGT1Q8N4V1 131 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 USP33Q8TEY7 942 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 C7orf25Q9BPX7 421 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 CCSER1Q9C0I3 900 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 POLD4Q9HCU8 107 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 TBC1D23Q9NUY8 699 aa11.62□□□□□ -0.55
CCDC144B-208ENST00000618081 ADGRB3O60242 1522 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 CCL15-CCL14A0A0B4J2E2 113 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 PRR23AA6NEV1 266 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 F8W810 466 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 ETFBP38117 255 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 CCL15Q16663 113 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 PLA2G4FQ68DD2 849 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 USP6NLQ92738 828 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 TMEM117Q9H0C3 514 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 ZCWPW1Q9H0M4 648 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 LNPEPQ9UIQ6 1025 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 RNF103O00237 685 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 GRAP2O75791 330 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 CYP19A1P11511 503 aaPredicted RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 NMT1P30419 496 aaKnown RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 FDFT1P37268 417 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 REEP2Q9BRK0 252 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 EPN3Q9H201 632 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 ALG13Q9NP73 1137 aaKnown RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 LIMA1Q9UHB6 759 aaKnown RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 DPP7Q9UHL4 492 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 EIF3LQ9Y262 564 aaKnown RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 GSG1L2A8MUP6 293 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 F5H5T6 163 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 HNRNPCP07910 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 C4BPBP20851 252 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 BAATQ14032 418 aaPredicted RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 PDIA6Q15084 440 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 SYCP2LQ5T4T6 812 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 BRINP3Q76B58 766 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 MB21D2Q8IYB1 491 aaPredicted RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 CYFIP2Q96F07 1278 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 YME1L1Q96TA2 773 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 MAPK1P28482 360 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 CSE1LP55060 971 aaKnown RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 SCARF1Q14162 830 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 ARMC7Q9H6L4 198 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 CHD4Q14839 1912 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 ESYT3A0FGR9 886 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 CD2BP2O95400 341 aaKnown RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 NUP62P37198 522 aaPredicted RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 FNTAP49354 379 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 ZNF543Q08ER8 600 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 RSPH1Q8WYR4 309 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 SGSM3Q96HU1 749 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 PRRG3Q9BZD7 231 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 GJB4Q9NTQ9 266 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 AAR2Q9Y312 384 aaKnown RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 MRFAP1Q9Y605 127 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 SNRPAP09012 282 aaKnown RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 GTF2A2P52657 109 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 SLC20A1Q8WUM9 679 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 CAMKK2Q96RR4 588 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 DMAP1Q9NPF5 467 aaPredicted RBP11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 STMN3Q9NZ72 180 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 RPS6KB2Q9UBS0 482 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 AKR1B1P15121 316 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 E2F4Q16254 413 aa11.61□□□□□ -0.55
CCDC144B-208ENST00000618081 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms