RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 SRRM3A6NNA2 597 aaPredicted RBP16.6■□□□□ 0.25
NR1H3-235ENST00000616973 ZNF865P0CJ78 1059 aaPredicted RBP16.6■□□□□ 0.25
NR1H3-235ENST00000616973 TCF4P15884 667 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 HOXA11P31270 313 aaPredicted RBP16.6■□□□□ 0.25
NR1H3-235ENST00000616973 GJC1P36383 396 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 KIZQ2M2Z5 673 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 KRT71Q3SY84 523 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 ATP13A4Q4VNC1 1196 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 DNAJC21Q5F1R6 531 aaKnown RBP16.6■□□□□ 0.25
NR1H3-235ENST00000616973 MFSD7Q6UXD7 560 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 SPOCD1Q6ZMY3 1216 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 TRMT10CQ7L0Y3 403 aaKnown RBP16.6■□□□□ 0.25
NR1H3-235ENST00000616973 XYLT1Q86Y38 959 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 BBOF1Q8ND07 529 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 KIF12Q96FN5 646 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 CPXM1Q96SM3 734 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 CPA4Q9UI42 421 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 EFR3BQ9Y2G0 817 aa16.6■□□□□ 0.25
NR1H3-235ENST00000616973 NPTXRO95502 500 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 AXLP30530 894 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 RFC1P35251 1148 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-235ENST00000616973 PSMC1P62191 440 aaKnown RBP16.59■□□□□ 0.25
NR1H3-235ENST00000616973 MYO1EQ12965 1108 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 ACAP1Q15027 740 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 STILQ15468 1287 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 ZBTB6Q15916 424 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 CCDC89Q8N998 374 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 TLCD1Q96CP7 247 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 MCRS1Q96EZ8 462 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 CCDC114Q96M63 670 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 TRAIPQ9BWF2 469 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 CENPHQ9H3R5 247 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 SEMA4AQ9H3S1 761 aa16.59■□□□□ 0.25
NR1H3-235ENST00000616973 HAS3O00219 553 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 RIPK2O43353 540 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 ERBB2P04626 1255 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 ATF2P15336 505 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 FGFR4P22455 802 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 PSMA2P25787 234 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 MDH1P40925 334 aaKnown RBP16.58■□□□□ 0.25
NR1H3-235ENST00000616973 GPD2P43304 727 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 ATP1A2P50993 1020 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 ADAM17P78536 824 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 SLC29A2Q14542 456 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 TFDP3Q5H9I0 405 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 CST9Q5W186 159 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 NOTUMQ6P988 496 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 CATSPER4Q7RTX7 472 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 JOSD2Q8TAC2 188 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 CCHCR1Q8TD31 782 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 USP6NLQ92738 828 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 PGM2Q96G03 612 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 SNX27Q96L92 541 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 RRAGCQ9HB90 399 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 DRG1Q9Y295 367 aaKnown RBP16.58■□□□□ 0.25
NR1H3-235ENST00000616973 Q9Y3F1 56 aa16.58■□□□□ 0.25
NR1H3-235ENST00000616973 hCG_1818297A0A087WSY0 165 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 PI4K2BG5E9Z4 385 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 GOLGA8SH3BPF8 625 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 LIASO43766 372 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 KRT7P08729 469 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 CYP2C9P11712 490 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 DARSP14868 501 aaKnown RBP16.58■□□□□ 0.24
NR1H3-235ENST00000616973 CDKN2BP42772 138 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 NDST1P52848 882 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 SLC25A11Q02978 314 aaKnown RBP16.58■□□□□ 0.24
NR1H3-235ENST00000616973 PDCLQ13371 301 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 ORC1Q13415 861 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 MFSD10Q14728 455 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 PRAMEF19Q5SWL8 479 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 LCLAT1Q6UWP7 414 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 ZNF365Q70YC5 407 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 TLK2Q86UE8 772 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 HEXIM2Q96MH2 286 aaKnown RBP16.58■□□□□ 0.24
NR1H3-235ENST00000616973 NT5C1AQ9BXI3 368 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 MIS12Q9H081 205 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 FAM49AQ9H0Q0 323 aaPredicted RBP16.58■□□□□ 0.24
NR1H3-235ENST00000616973 AAASQ9NRG9 546 aa16.58■□□□□ 0.24
NR1H3-235ENST00000616973 MANSC4A6NHS7 340 aaPredicted RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 M0QYV0 167 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 SHBGP04278 402 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 KLRC2P26717 231 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ITGA8P53708 1063 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ADCY2Q08462 1091 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 HADHQ16836 314 aaKnown RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ODF2Q5BJF6 829 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ZFYVE27Q5T4F4 411 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 OLFML2BQ68BL8 750 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 TXNRD3NBQ6F5E7 133 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 ALKAL1Q6UXT8 129 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 RAPGEF5Q92565 580 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 TSPAN18Q96SJ8 248 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 SYNCQ9H7C4 482 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 KLHL11Q9NVR0 708 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 SNTG2Q9NY99 539 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 FLRT1Q9NZU1 646 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 TJP2Q9UDY2 1190 aa16.57■□□□□ 0.24
NR1H3-235ENST00000616973 NOVA2Q9UNW9 492 aaKnown RBP16.57■□□□□ 0.24
NR1H3-235ENST00000616973 C3orf70A6NLC5 250 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms