RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	AP3M2	P53677	418 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PLCB2	Q00722	1185 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CYP24A1	Q07973	514 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	BIRC3	Q13489	604 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CUL4B	Q13620	913 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PKP1	Q13835	747 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PSMD6	Q15008	389 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	ARHGAP29	Q52LW3	1261 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	VIT	Q6UXI7	678 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	TRAPPC11	Q7Z392	1133 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	SCN4B	Q8IWT1	228 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	FSIP1	Q8NA03	581 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	GLIS3	Q8NEA6	775 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	ZSWIM2	Q8NEG5	633 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	SCFD1	Q8WVM8	642 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	FAM3C	Q92520	227 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	SYAP1	Q96A49	352 aa	Predicted RBP	11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CGRRF1	Q99675	332 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PI4K2A	Q9BTU6	479 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	DDX23	Q9BUQ8	820 aa	Known RBP	11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	ZNF334	Q9HCZ1	680 aa	Predicted RBP	11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	OBP2A	Q9NY56	170 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CDH9	Q9ULB4	789 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	NDRG2	Q9UN36	371 aa	Known RBP	11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PIAS3	Q9Y6X2	628 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197	TRIP11	Q15643	1979 aa		11.75	□□□□□ -0.53
NPIPB4-222	ENST00000614197		A0A1B0GVL5	298 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	TGFB1I1	O43294	461 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	ATF6	P18850	670 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CD72	P21854	359 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CASP1	P29466	404 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	ATIC	P31939	592 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CDR1	P51861	262 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	WNT7B	P56706	349 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CYP4F8	P98187	520 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	AMPD2	Q01433	879 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	BMT2	Q1RMZ1	405 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	GAREM2	Q75VX8	874 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	LRRTM3	Q86VH5	581 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	C12orf56	Q8IXR9	622 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CELF5	Q8N6W0	485 aa	Known RBP	11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	OR5B17	Q8NGF7	314 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	BPIFB1	Q8TDL5	484 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	EXOC4	Q96A65	974 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PAGE5	Q96GU1	130 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	SYT15	Q9BQS2	421 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	IER2	Q9BTL4	223 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	LRRC3	Q9BY71	257 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	DNAI2	Q9GZS0	605 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	KIF9	Q9HAQ2	790 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	SIX4	Q9UIU6	781 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	GTF3C4	Q9UKN8	822 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	FBXO4	Q9UKT5	387 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	FRMD4B	Q9Y2L6	1034 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	KMT2E	Q8IZD2	1858 aa		11.74	□□□□□ -0.53
NPIPB4-222	ENST00000614197	SOBP	A7XYQ1	873 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CALU	O43852	315 aa	Predicted RBP	11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	ATP8B3	O60423	1300 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	FAM163B	P0C2L3	166 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	SP9	P0CG40	484 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	P4HA1	P13674	534 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	TARS	P26639	723 aa	Known RBP	11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	GNL1	P36915	607 aa	Predicted RBP	11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	RPS9	P46781	194 aa	Known RBP	11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PDE6C	P51160	858 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	MLLT6	P55198	1093 aa	Predicted RBP	11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CYP27A1	Q02318	531 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	EHHADH	Q08426	723 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	LRRC32	Q14392	662 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	SOWAHA	Q2M3V2	549 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	WDR72	Q3MJ13	1102 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	KMT5B	Q4FZB7	885 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CFAP221	Q4G0U5	840 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	VSTM1	Q6UX27	236 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	GRAMD1C	Q8IYS0	662 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	OR6B3	Q8NGW1	331 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	ATRIP	Q8WXE1	791 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	HINFP	Q9BQA5	517 aa		11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	NXF1	Q9UBU9	619 aa	Known RBP	11.73	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PDCD11	Q14690	1871 aa	Known RBP	11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PRR23A	A6NEV1	266 aa		11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	GABRD	O14764	452 aa		11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	ACTN4	O43707	911 aa	Known RBP	11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	KIN	O60870	393 aa	Known RBP	11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	LMNA	P02545	664 aa	Known RBP	11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	RPN1	P04843	607 aa	Known RBP	11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	PDGFRB	P09619	1106 aa		11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	WARS	P23381	471 aa	Known RBP	11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CYP2F1	P24903	491 aa		11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	WEE1	P30291	646 aa		11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	HOXD13	P35453	343 aa		11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	GRIK1	P39086	918 aa		11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	MAGEA11	P43364	429 aa		11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	NLRP12	P59046	1061 aa		11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	CSTF1	Q05048	431 aa	Known RBP	11.72	□□□□□ -0.53
NPIPB4-222	ENST00000614197	FCHO2	Q0JRZ9	810 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms