RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 EFCAB13Q8IY85 973 aa25.32■■□□□ 1.64
MMP28-203ENST00000612672 BLOC1S4Q9NUP1 217 aa25.32■■□□□ 1.64
MMP28-203ENST00000612672 KCNG1Q9UIX4 513 aa25.32■■□□□ 1.64
MMP28-203ENST00000612672 ANTXRLA6NF34 631 aa25.31■■□□□ 1.64
MMP28-203ENST00000612672 GIPC1O14908 333 aa25.31■■□□□ 1.64
MMP28-203ENST00000612672 GALK1P51570 392 aa25.31■■□□□ 1.64
MMP28-203ENST00000612672 WNT7BP56706 349 aa25.31■■□□□ 1.64
MMP28-203ENST00000612672 DHX8Q14562 1220 aaKnown RBP25.31■■□□□ 1.64
MMP28-203ENST00000612672 SPPL2BQ8TCT7 592 aa25.31■■□□□ 1.64
MMP28-203ENST00000612672 TSPAN18Q96SJ8 248 aa25.31■■□□□ 1.64
MMP28-203ENST00000612672 ODF2LQ9ULJ1 636 aa25.31■■□□□ 1.64
MMP28-203ENST00000612672 PCDHGA5Q9Y5G8 931 aa25.31■■□□□ 1.64
MMP28-203ENST00000612672 THADAQ6YHU6 1953 aa25.31■■□□□ 1.64
MMP28-203ENST00000612672 H0YCG3 227 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 AKAP3O75969 853 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 PSAPL1Q6NUJ1 521 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 CD302Q8IX05 232 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 MYCT1Q8N699 235 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 RPLP0P6Q8NHW5 317 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 FAM84AQ96KN4 292 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 SLC22A12Q96S37 553 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 TDP1Q9NUW8 608 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 DERAQ9Y315 318 aa25.3■■□□□ 1.64
MMP28-203ENST00000612672 GJA4P35212 333 aa25.29■■□□□ 1.64
MMP28-203ENST00000612672 AVPR1AP37288 418 aa25.29■■□□□ 1.64
MMP28-203ENST00000612672 TAF6P49848 677 aa25.29■■□□□ 1.64
MMP28-203ENST00000612672 ZC2HC1CQ53FD0 456 aaPredicted RBP25.29■■□□□ 1.64
MMP28-203ENST00000612672 CRELD2Q6UXH1 353 aaPredicted RBP25.29■■□□□ 1.64
MMP28-203ENST00000612672 C2orf15Q8WU43 125 aaKnown RBP25.29■■□□□ 1.64
MMP28-203ENST00000612672 CDK5RAP3Q96JB5 506 aa25.29■■□□□ 1.64
MMP28-203ENST00000612672 ZSCAN31Q96LW9 406 aaPredicted RBP25.29■■□□□ 1.64
MMP28-203ENST00000612672 PI4K2AQ9BTU6 479 aa25.29■■□□□ 1.64
MMP28-203ENST00000612672 CCSER1Q9C0I3 900 aa25.29■■□□□ 1.64
MMP28-203ENST00000612672 VPS45Q9NRW7 570 aa25.29■■□□□ 1.64
MMP28-203ENST00000612672 DPP3Q9NY33 737 aa25.29■■□□□ 1.64
MMP28-203ENST00000612672 DSEQ9UL01 958 aa25.29■■□□□ 1.64
MMP28-203ENST00000612672 ATG13O75143 517 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 GRIN1Q05586 938 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 BFSP1Q12934 665 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 MCM6Q14566 821 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 TAF12Q16514 161 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 RNF43Q68DV7 783 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 CAMKK1Q8N5S9 505 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 KCTD17Q8N5Z5 321 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 ZSWIM2Q8NEG5 633 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 EDEM2Q9BV94 578 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 PARVGQ9HBI0 331 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 SH2B1Q9NRF2 756 aaPredicted RBP25.28■■□□□ 1.64
MMP28-203ENST00000612672 MAGED2Q9UNF1 606 aaPredicted RBP25.28■■□□□ 1.64
MMP28-203ENST00000612672 C2CD2Q9Y426 696 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 ATRXP46100 2492 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 DMXL2Q8TDJ6 3036 aa25.28■■□□□ 1.64
MMP28-203ENST00000612672 TNRC6BQ9UPQ9 1833 aaKnown RBP25.28■■□□□ 1.64
MMP28-203ENST00000612672 C1QTNF9BB2RNN3 333 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 TRAK2O60296 914 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 FAM13AO94988 1023 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 C1QTNF9P0C862 333 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 PAX3P23760 479 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 GTF2BQ00403 316 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 PTPAQ15257 358 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 ZNF77Q15935 545 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 MCTP1Q6DN14 999 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 MON1AQ86VX9 555 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 METTL23Q86XA0 190 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 P2RY13Q9BPV8 354 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 ASB7Q9H672 318 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 KIF9Q9HAQ2 790 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 INVSQ9Y283 1065 aa25.27■■□□□ 1.64
MMP28-203ENST00000612672 LAMA5O15230 3695 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 HCRTO43612 131 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 DRD1P21728 446 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 DDX6P26196 483 aaKnown RBP eCLIP25.26■■□□□ 1.63
MMP28-203ENST00000612672 MTF1Q14872 753 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 DDR2Q16832 855 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 RILPL1Q5EBL4 403 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 THEM5Q8N1Q8 247 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 CYP2S1Q96SQ9 504 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 ECT2Q9H8V3 914 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 WASF3Q9UPY6 502 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 PCDHB5Q9Y5E4 795 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 WNT6Q9Y6F9 365 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 STYXL1Q9Y6J8 313 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 PKD1L2Q7Z442 2459 aa25.26■■□□□ 1.63
MMP28-203ENST00000612672 DSPP15924 2871 aaKnown RBP25.26■■□□□ 1.63
MMP28-203ENST00000612672 LNP1A1A4G5 178 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 C4orf47A7E2U8 309 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 TOP3BO95985 862 aaKnown RBP25.25■■□□□ 1.63
MMP28-203ENST00000612672 SPINK2P20155 84 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 CREB5Q02930 508 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 USP4Q13107 963 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 DMC1Q14565 340 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 ZNF268Q14587 947 aaPredicted RBP25.25■■□□□ 1.63
MMP28-203ENST00000612672 ADALQ6DHV7 355 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 SYT13Q7L8C5 426 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 PKMYT1Q99640 499 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 ZMYM5Q9UJ78 669 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 L1RE1Q9UN81 338 aa25.25■■□□□ 1.63
MMP28-203ENST00000612672 ASCC3Q8N3C0 2202 aaKnown RBP25.25■■□□□ 1.63
MMP28-203ENST00000612672 NBEAQ8NFP9 2946 aa25.24■■□□□ 1.63
MMP28-203ENST00000612672 BCLAF3A2AJT9 711 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms