RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ARL4AP40617 200 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 MAMLD1Q13495 774 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 SURF1Q15526 300 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 Q3C1V9 767 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 MAP7D1Q3KQU3 841 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ANO5Q75V66 913 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 WDR75Q8IWA0 830 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 CCDC60Q8IWA6 550 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 PPIL6Q8IXY8 311 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 MICALL2Q8IY33 904 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ZNF280CQ8ND82 737 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 TCP10LQ8TDR4 215 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 PRPF31Q8WWY3 499 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 PPP1R36Q96LQ0 422 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 MBOAT7Q96N66 472 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 TUBB6Q9BUF5 446 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 C12orf65Q9H3J6 166 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 YY1AP1Q9H869 796 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 C15orf41Q9Y2V0 281 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 COMMD10Q9Y6G5 202 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 MYO5AQ9Y4I1 1855 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 C4AP0C0L4 1744 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 C4BP0C0L5 1744 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 O00370 1275 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 DNALI1O14645 258 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 CCDC22O60826 627 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 OATP04181 439 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 NCALDP61601 193 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 RCN1Q15293 331 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 SPRED3Q2MJR0 410 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 RIBC1Q8N443 379 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 OR5B17Q8NGF7 314 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 HELQQ8TDG4 1101 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 LRRN4Q8WUT4 740 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 DNAJC9Q8WXX5 260 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 RMDN2Q96LZ7 410 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 FOXP3Q9BZS1 431 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 TRIM4Q9C037 500 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 VCX3BQ9H321 246 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 C17orf75Q9HAS0 396 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 MYOZ2Q9NPC6 264 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ARMCX1Q9P291 453 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 PLIN4Q96Q06 1357 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 PAPPAQ13219 1627 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 LOC100653049A0A140TA62 436 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 A0A1W2PPM1 405 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 RASSF9O75901 435 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 KRT34O76011 436 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 CCNE2O96020 404 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 MAPTP10636 758 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 BGNP21810 368 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 VCPP55072 806 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 MRPS9P82933 396 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 XRCC4Q13426 336 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 BMPR2Q13873 1038 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 FASTKD3Q14CZ7 662 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 SPDYCQ5MJ68 293 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 UBAP2Q5T6F2 1119 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 NBPF12Q5TAG4 269 aaPredicted RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 TDRD10Q5VZ19 366 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 CYP4X1Q8N118 509 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 NDUFAF2Q8N183 169 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 DCLK2Q8N568 766 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 FITM2Q8N6M3 262 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 RNF169Q8NCN4 708 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 BSNDQ8WZ55 320 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 MTFR1LQ9H019 292 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 DLGAP2Q9P1A6 1054 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 NVLO15381 856 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 CREB3O43889 395 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ZBTB7AO95365 584 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 PYGBP11216 843 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ADORA2BP29275 332 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 PEX5P50542 639 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 AP1ARQ63HQ0 302 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 STYK1Q6J9G0 422 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 TMEM154Q6P9G4 183 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 LRRC6Q86X45 466 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 RAB3IL1Q8TBN0 382 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 SLC26A7Q8TE54 656 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 GPRASP2Q96D09 838 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 SPATA33Q96N06 139 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 AGAP3Q96P47 875 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 NOCTQ9UK39 431 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 APOBEC2Q9Y235 224 aaKnown RBP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 INPP5FQ9Y2H2 1132 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 NUB1Q9Y5A7 615 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ZMYM2Q9UBW7 1377 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 WNT10BO00744 389 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ZC3H11AO75152 810 aaKnown RBP eCLIP7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ENTPD5O75356 428 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 UPP2O95045 317 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 MYL2P10916 166 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 OSBPP22059 807 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 ELK3P41970 407 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 TAP1Q03518 808 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 CXCL9Q07325 125 aa7.19□□□□□ -1.26
SYNPO2-206ENST00000610556 THOC5Q13769 683 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms