RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 SMYD3Q9H7B4 428 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 SYNCQ9H7C4 482 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 CNOT10Q9H9A5 744 aaKnown RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 ROPN1Q9HAT0 212 aaPredicted RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 GNEQ9Y223 722 aaKnown RBP12.62□□□□□ -0.39
USP6NL-206ENST00000609853 NEU2Q9Y3R4 380 aa12.62□□□□□ -0.39
USP6NL-206ENST00000609853 F8VP50 259 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 KRT1P04264 644 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 PSMA2P25787 234 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 IVDP26440 423 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 MDH1P40925 334 aaKnown RBP12.61□□□□□ -0.39
USP6NL-206ENST00000609853 RAP1GAPP47736 663 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 CPT1AP50416 773 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 YARSP54577 528 aaKnown RBP12.61□□□□□ -0.39
USP6NL-206ENST00000609853 CDH8P55286 799 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 SNX16P57768 344 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 SNX1Q13596 522 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 RHBDF2Q6PJF5 856 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 LCLAT1Q6UWP7 414 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 SPOCD1Q6ZMY3 1216 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 LRRC52Q8N7C0 313 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 OR2W6PQ8NHA6 318 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 IPO4Q8TEX9 1081 aaKnown RBP12.61□□□□□ -0.39
USP6NL-206ENST00000609853 KIF12Q96FN5 646 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 CCDC114Q96M63 670 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 NT5C1AQ9BXI3 368 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 HEMGNQ9BXL5 484 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 ELOVL4Q9GZR5 314 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 CENPHQ9H3R5 247 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 SETD4Q9NVD3 440 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 TRIP11Q15643 1979 aa12.61□□□□□ -0.39
USP6NL-206ENST00000609853 GRIN2DO15399 1336 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 MANSC4A6NHS7 340 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-206ENST00000609853 O00370 1275 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 DYNC1LI2O43237 492 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-206ENST00000609853 RIPK2O43353 540 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 GPR32O75388 356 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 MICAL2O94851 1124 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 SMIM10L2AP0DMW4 78 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 SMIM10L2BP0DMW5 78 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 ATF7P17544 494 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-206ENST00000609853 ADCY8P40145 1251 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 PPP2R2AP63151 447 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 ZFYVE27Q5T4F4 411 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 OLFML2BQ68BL8 750 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 CATSPER4Q7RTX7 472 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 XYLT1Q86Y38 959 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 RELL1Q8IUW5 271 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 TTC13Q8NBP0 860 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 BEST2Q8NFU1 509 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 ATG4AQ8WYN0 398 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 RNF25Q96BH1 459 aaPredicted RBP12.6□□□□□ -0.39
USP6NL-206ENST00000609853 TLCD1Q96CP7 247 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 MCRS1Q96EZ8 462 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 HEXIM2Q96MH2 286 aaKnown RBP12.6□□□□□ -0.39
USP6NL-206ENST00000609853 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 ANAPC5Q9UJX4 755 aa12.6□□□□□ -0.39
USP6NL-206ENST00000609853 R3HDM2Q9Y2K5 976 aaKnown RBP12.6□□□□□ -0.39
USP6NL-206ENST00000609853 hCG_1818297A0A087WSY0 165 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 LIASO43766 372 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 GJB6O95452 261 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 SETSIPP0DME0 302 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 DARSP14868 501 aaKnown RBP12.59□□□□□ -0.39
USP6NL-206ENST00000609853 YY1P25490 414 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 HOXA11P31270 313 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-206ENST00000609853 RFC1P35251 1148 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-206ENST00000609853 GPD2P43304 727 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 OGDHQ02218 1023 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 PDCLQ13371 301 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 SLC29A2Q14542 456 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 ZBTB6Q15916 424 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 KIZQ2M2Z5 673 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 DNAJC21Q5F1R6 531 aaKnown RBP12.59□□□□□ -0.39
USP6NL-206ENST00000609853 CYP4A22Q5TCH4 519 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 DAB2IPQ5VWQ8 1189 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 MFSD7Q6UXD7 560 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 NKD2Q969F2 451 aaPredicted RBP12.59□□□□□ -0.39
USP6NL-206ENST00000609853 SNX27Q96L92 541 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 CPXM1Q96SM3 734 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 PPP1R16BQ96T49 567 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 NCAPGQ9BPX3 1015 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 KATNAL1Q9BW62 490 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 SEMA4AQ9H3S1 761 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 ASNSD1Q9NWL6 643 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 PDCD11Q14690 1871 aaKnown RBP12.59□□□□□ -0.39
USP6NL-206ENST00000609853 TRPM7Q96QT4 1865 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 DOCK3Q8IZD9 2030 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 M0QYV0 167 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 HAS3O00219 553 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 TP73O15350 636 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 XPOTO43592 962 aaKnown RBP12.59□□□□□ -0.39
USP6NL-206ENST00000609853 RNF8O76064 485 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 NPTXRO95502 500 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 AGTP01019 485 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 ITGAVP06756 1048 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 CYP2C9P11712 490 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 LSP1P33241 339 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 PCK1P35558 622 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 GJC1P36383 396 aa12.59□□□□□ -0.39
USP6NL-206ENST00000609853 CDKN2BP42772 138 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms