RNA–Protein interactions for RNA: ENST00000607836.1

AC009961.1-203, humanhuman

TSL 1 (best) BASIC

Gene AC009961.1, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.1-203ENST00000607836 ITGA8P53708 1063 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 CALCOCO2Q13137 446 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 ARFGAP1Q8N6T3 406 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 C12orf50Q8NA57 414 aaPredicted RBP16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 BCAS4Q8TDM0 211 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 EPS8L3Q8TE67 593 aaKnown RBP16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 TMEM40Q8WWA1 233 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 KAT2BQ92831 832 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 EMID1Q96A84 441 aaPredicted RBP16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 TMEM176AQ96HP8 235 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 PABPC3Q9H361 631 aaKnown RBP16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 NXF3Q9H4D5 531 aaKnown RBP16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 FAM49BQ9NUQ9 324 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 TUBGCP4Q9UGJ1 667 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 IL1R2P27930 398 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 DRG2P55039 364 aaKnown RBP16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 HP1BP3Q5SSJ5 553 aaPredicted RBP16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 DENND2CQ68D51 928 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 LRIG3Q6UXM1 1119 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 KATNAL2Q8IYT4 538 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 ART4Q93070 314 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 SLITRK1Q96PX8 696 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 NMRK2Q9NPI5 230 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 GJD2Q9UKL4 321 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 PCDHGC3Q9UN70 934 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 SNX9Q9Y5X1 595 aa16.16■□□□□ 0.18
AC009961.1-203ENST00000607836 LOC102724159A0A0B4J2E5 919 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 SHOX2O60902 331 aaPredicted RBP16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 LSM8O95777 96 aaKnown RBP16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 CD48P09326 243 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 CYP3A5P20815 502 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 CCT5P48643 541 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 PWP2Q15269 919 aaKnown RBP16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 PPP1R15BQ5SWA1 713 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 ZNF467Q7Z7K2 595 aaPredicted RBP16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 SESTD1Q86VW0 696 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 C3orf20Q8ND61 904 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 MDM1Q8TC05 714 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 AAASQ9NRG9 546 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 MTRF1LQ9UGC7 380 aaKnown RBP16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 LCMT1Q9UIC8 334 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 HMGB1P1B2RPK0 211 aaPredicted RBP16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 TREHO43280 583 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 IVDP26440 423 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 SF3A3Q12874 501 aaKnown RBP eCLIP16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 CCDC38Q502W7 563 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 TLK2Q86UE8 772 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 EXD1Q8NHP7 514 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 MRPL45Q9BRJ2 306 aaKnown RBP16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 ASB7Q9H672 318 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 SLC45A1Q9Y2W3 748 aa16.15■□□□□ 0.18
AC009961.1-203ENST00000607836 EIF3HO15372 352 aaKnown RBP eCLIP16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 CYP2C9P11712 490 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 ZNF157P51786 506 aaPredicted RBP16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 YWHAEP62258 255 aaKnown RBP16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 PLCB3Q01970 1234 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 MTM1Q13496 603 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 TAF1CQ15572 869 aaPredicted RBP16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 CDO1Q16878 200 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 KDM7AQ6ZMT4 941 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 ACOT1Q86TX2 421 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 XYLT1Q86Y38 959 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 ATL2Q8NHH9 583 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 ADAMTS10Q9H324 1103 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 GOLGA2P5Q9HBQ8 144 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 PPANQ9NQ55 473 aaKnown RBP16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 GPR32O75388 356 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 LRCH4O75427 683 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 MYL3P08590 195 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 IBSPP21815 317 aaPredicted RBP16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 IFI35P80217 286 aaPredicted RBP16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 IQSEC1Q6DN90 963 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 IFNLR1Q8IU57 520 aaPredicted RBP16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 ZNF148Q9UQR1 794 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 NME7Q9Y5B8 376 aa16.14■□□□□ 0.17
AC009961.1-203ENST00000607836 ATF2P15336 505 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 CDH5P33151 784 aaPredicted RBP16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 POU5F1BQ06416 359 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 LONRF1Q17RB8 773 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 SPOCD1Q6ZMY3 1216 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 ZNF365Q70YC5 407 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 HSPH1Q92598 858 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 TMEM121Q9BTD3 319 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 TRIM6Q9C030 488 aaPredicted RBP16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 CDC42EP4Q9H3Q1 356 aaKnown RBP16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 CACNG4Q9UBN1 327 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 RIPK2O43353 540 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 GAS8O95995 478 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 IFNB1P01574 187 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 LSP1P33241 339 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 NRLP54845 237 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 SKOR1P84550 965 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 KYNUQ16719 465 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 FAM102AQ5T9C2 384 aaPredicted RBP16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 ZNF518BQ9C0D4 1074 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 TSPAN16Q9UKR8 245 aa16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.13■□□□□ 0.17
AC009961.1-203ENST00000607836 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms