RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 NDNQ99608 321 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 NUDT12Q9BQG2 462 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 NLRP1Q9C000 1473 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 SIN3BO75182 1162 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 GNAT1P11488 350 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 SMCO1Q147U7 214 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 DHX40Q8IX18 779 aaKnown RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 TBC1D21Q8IYX1 336 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 ZNF112Q9UJU3 913 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 DUOX1Q9NRD9 1551 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 BTBD18B2RXH4 712 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 ATP6V1C1P21283 382 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 COPAP53621 1224 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 CCDC149Q6ZUS6 474 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 ZNF677Q86XU0 584 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 DNAAF3Q8N9W5 541 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 ZNF512BQ96KM6 892 aaPredicted RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 HIPK3Q9H422 1215 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 BICC1Q9H694 974 aaKnown RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 RUBCNLQ9H714 662 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 CPS1P31327 1500 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 SERPINF2P08697 491 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 DNAJB1P25685 340 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 POLD1P28340 1107 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 FLIIQ13045 1269 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 DNAJA4Q8WW22 397 aaPredicted RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 C18orf8Q96DM3 657 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 IFT52Q9Y366 437 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 MAGED1Q9Y5V3 778 aaPredicted RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 CLOCKO15516 846 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 PJA2O43164 708 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 CYP2C9P11712 490 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 CAPGP40121 348 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 SLC18A3Q16572 532 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 FAM98BQ52LJ0 330 aaKnown RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 THEM5Q8N1Q8 247 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 NATD1Q8N6N6 113 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 PTPRN2Q92932 1015 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 PCDH10Q9P2E7 1040 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 TRHDEQ9UKU6 1024 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 C2CD2Q9Y426 696 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 PARD3Q8TEW0 1356 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 PGM3O95394 542 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 CXCR5P32302 372 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 YAP1P46937 504 aaKnown RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 ALDH1A3P47895 512 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 KCNQ4P56696 695 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 SESN2P58004 480 aaPredicted RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 BLMHQ13867 455 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 NEDD4LQ96PU5 975 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 INO80BQ9C086 356 aaPredicted RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 GOLPH3Q9H4A6 298 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 ADD3Q9UEY8 706 aaKnown RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 EYA2O00167 538 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 CAPN15O75808 1086 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 HSF2Q03933 536 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 UAP1Q16222 522 aaPredicted RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 FAXCQ5TGI0 409 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 MTURNQ8N3F0 131 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 FAM133AQ8N9E0 248 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 DRAXINQ8NBI3 349 aaPredicted RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 GORASP1Q9BQQ3 440 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 RNPEPL1Q9HAU8 725 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 PCDHGB1Q9Y5G3 927 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 S100A12P80511 92 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 MCL1Q07820 350 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 XAGE2Q96GT9 111 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 C1orf21Q9H246 121 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 PRKAG2Q9UGJ0 569 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 GIT1Q9Y2X7 761 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 ACOT9Q9Y305 439 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 MLH3Q9UHC1 1453 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 SNX3O60493 162 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 UQCRC1P31930 480 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 HIST2H2ACQ16777 129 aaPredicted RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 HIST2H2AA3Q6FI13 130 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 CENPPQ6IPU0 288 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 SUN5Q8TC36 379 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 DDX17Q92841 729 aaKnown RBP3.53□□□□□ -1.84
NEB-218ENST00000603639 ZUFSPQ96AP4 578 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 BTBD9Q96Q07 612 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 CHID1Q9BWS9 393 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 NLRC4Q9NPP4 1024 aa3.53□□□□□ -1.84
NEB-218ENST00000603639 A0A0X1KG70 313 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 FABP12A6NFH5 140 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 AQP12BA6NM10 295 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 IL32P24001 234 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 PSEN1P49768 467 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 RAB43Q86YS6 212 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 ULK2Q8IYT8 1036 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 SNRPB2P08579 225 aaKnown RBP3.53□□□□□ -1.85
NEB-218ENST00000603639 ITGAXP20702 1163 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 KCNV1Q6PIU1 500 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 CDH24Q86UP0 819 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 MYCBPAPQ8TBZ2 947 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 TBCCD1Q9NVR7 557 aa3.53□□□□□ -1.85
NEB-218ENST00000603639 CCNHP51946 323 aaPredicted RBP3.52□□□□□ -1.85
NEB-218ENST00000603639 STRIP1Q5VSL9 837 aa3.52□□□□□ -1.85
NEB-218ENST00000603639 FAF2Q96CS3 445 aa3.52□□□□□ -1.85
NEB-218ENST00000603639 MMS19Q96T76 1030 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms