RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CENPUQ71F23 418 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 ASRGL1Q7L266 308 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 TAB3Q8N5C8 712 aaPredicted RBP21.29■■□□□ 1
SHKBP1-225ENST00000600733 DNERQ8NFT8 737 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 SLC35B2Q8TB61 432 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 GRAMD1AQ96CP6 724 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 SMC6Q96SB8 1091 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 MRPL4Q9BYD3 311 aaKnown RBP21.29■■□□□ 1
SHKBP1-225ENST00000600733 UBN1Q9NPG3 1134 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 ARHGEF3Q9NR81 526 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 NRBP2Q9NSY0 501 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 DDX56Q9NY93 547 aaKnown RBP21.29■■□□□ 1
SHKBP1-225ENST00000600733 HOXC10Q9NYD6 342 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 AGTPBP1Q9UPW5 1226 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 SHOC2Q9UQ13 582 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 EIF4BP23588 611 aaKnown RBP21.29■■□□□ 1
SHKBP1-225ENST00000600733 MARK3P27448 753 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 IL1R2P27930 398 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 AP3M2P53677 418 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 ACVR2BQ13705 512 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 SGSM1Q2NKQ1 1148 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 PTPN20Q4JDL3 420 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 ANGEL2Q5VTE6 544 aaKnown RBP21.29■■□□□ 1
SHKBP1-225ENST00000600733 ARFGAP1Q8N6T3 406 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 NIPA2Q8N8Q9 360 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 JOSD2Q8TAC2 188 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 ACTL9Q8TC94 416 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 AGAP11Q8TF27 550 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 STAMBPL1Q96FJ0 436 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 ACO2Q99798 780 aaKnown RBP21.29■■□□□ 1
SHKBP1-225ENST00000600733 PHTF1Q9UMS5 762 aa21.29■■□□□ 1
SHKBP1-225ENST00000600733 MAFO75444 373 aaPredicted RBP21.28■■□□□ 1
SHKBP1-225ENST00000600733 CA4P22748 312 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 PSMA2P25787 234 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 ASPAP45381 313 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 GPX6P59796 221 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 OSTNP61366 133 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 OTUD4Q01804 1114 aaKnown RBP21.28■■□□□ 1
SHKBP1-225ENST00000600733 SPARCL1Q14515 664 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 EFTUD2Q15029 972 aaKnown RBP eCLIP21.28■■□□□ 1
SHKBP1-225ENST00000600733 SLC1A5Q15758 541 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 ZNF699Q32M78 642 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 ANKRD22Q5VYY1 191 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 EEPD1Q7L9B9 569 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 ZNF668Q96K58 619 aaPredicted RBP21.28■■□□□ 1
SHKBP1-225ENST00000600733 ZNF518BQ9C0D4 1074 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 CYTH4Q9UIA0 394 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 AFG3L2Q9Y4W6 797 aa21.28■■□□□ 1
SHKBP1-225ENST00000600733 CDH5P33151 784 aaPredicted RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 TCF7P36402 384 aaPredicted RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 CTCFP49711 727 aaPredicted RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 SLC25A11Q02978 314 aaKnown RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 TAP1Q03518 808 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 HIF1AQ16665 826 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 KIAA0319LQ8IZA0 1049 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 LRRC71Q8N4P6 559 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 RNF149Q8NC42 400 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 GIMAP7Q8NHV1 300 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 GEMIN8Q9NWZ8 242 aaKnown RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 NXF1Q9UBU9 619 aaKnown RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 PCDHGC3Q9UN70 934 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 POLIQ9UNA4 740 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 FARP1Q9Y4F1 1045 aaPredicted RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 CLUHO75153 1309 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 OGTO15294 1046 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 MAGEB2O15479 319 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 LRCH4O75427 683 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 RAP1GAPP47736 663 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 HIRAP54198 1017 aaPredicted RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 PRKG1Q13976 671 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 MSS51Q4VC12 460 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 DALRD3Q5D0E6 543 aaKnown RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 CDR2LQ86X02 465 aaPredicted RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 TMEM130Q8N3G9 435 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 MAK16Q9BXY0 300 aaKnown RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 XYLT2Q9H1B5 865 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 MYLK2Q9H1R3 596 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 CPSF3Q9UKF6 684 aaKnown RBP21.27■■□□□ 1
SHKBP1-225ENST00000600733 STARD13Q9Y3M8 1113 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 CEP83Q9Y592 693 aa21.27■■□□□ 1
SHKBP1-225ENST00000600733 CST8O60676 142 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 PRKCBP05771 671 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 CD48P09326 243 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 HOXC6P09630 235 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 ALADP13716 330 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 CCNB1P14635 433 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 CD19P15391 556 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 SSTR1P30872 391 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 EFNA5P52803 228 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 LAMTOR4Q0VGL1 99 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 GRM1Q13255 1194 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 ORC1Q13415 861 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 FNBP1LQ5T0N5 605 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 TRIM50Q86XT4 487 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 THNSL1Q8IYQ7 743 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 EMC1Q8N766 993 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 KLRG1Q96E93 195 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 SMG5Q9UPR3 1016 aaKnown RBP21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 MGAMO43451 1857 aa21.26■□□□□ 0.99
SHKBP1-225ENST00000600733 ABLIM1O14639 778 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms