RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 GPR88Q9GZN0 384 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 ELOVL4Q9GZR5 314 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 LHX5Q9H2C1 402 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 NSUN3Q9H649 340 aaKnown RBP13.07□□□□□ -0.32
TGFB1-204ENST00000600196 PNPLA8Q9NP80 782 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 ZNHIT6Q9NWK9 470 aaKnown RBP13.07□□□□□ -0.32
TGFB1-204ENST00000600196 COMMD8Q9NX08 183 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 EHD2Q9NZN4 543 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 PCDHGC3Q9UN70 934 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 PCDHB5Q9Y5E4 795 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 TIMM13Q9Y5L4 95 aaPredicted RBP13.07□□□□□ -0.32
TGFB1-204ENST00000600196 GBF1Q92538 1859 aa13.07□□□□□ -0.32
TGFB1-204ENST00000600196 RANBP2P49792 3224 aaKnown RBP13.07□□□□□ -0.32
TGFB1-204ENST00000600196 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 AKR1B15C9JRZ8 316 aaPredicted RBP13.06□□□□□ -0.32
TGFB1-204ENST00000600196 EPHB6O15197 1021 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 GYPCP04921 128 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 CNPP09543 421 aaKnown RBP13.06□□□□□ -0.32
TGFB1-204ENST00000600196 SETSIPP0DME0 302 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 SRGAP2BP0DMP2 458 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 DNAJB1P25685 340 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 HOXA9P31269 272 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 OR1D2P34982 312 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 CLCN1P35523 988 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 KRT9P35527 623 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 SNX16P57768 344 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 PLD1Q13393 1074 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 ARHGAP44Q17R89 818 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 LCLAT1Q6UWP7 414 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 TRIM72Q6ZMU5 477 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 CCDC149Q6ZUS6 474 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 OSTM1Q86WC4 334 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 ANKRD52Q8NB46 1076 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 OR10T2Q8NGX3 314 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 CYFIP2Q96F07 1278 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 PANX2Q96RD6 677 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 ARID3AQ99856 593 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 TTYH1Q9H313 450 aaPredicted RBP13.06□□□□□ -0.32
TGFB1-204ENST00000600196 CYLDQ9NQC7 956 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 MTUS1Q9ULD2 1270 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 ASB3Q9Y575 518 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 CDY1Q9Y6F8 540 aa13.06□□□□□ -0.32
TGFB1-204ENST00000600196 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.05□□□□□ -0.32
TGFB1-204ENST00000600196 RBAK-RBAKDNI3L0D1 243 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 GLUD1P00367 558 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 KRT5P13647 590 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 CYP11B1P15538 503 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 CD58P19256 250 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 KLRC2P26717 231 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 ELF1P32519 619 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 KLK7P49862 253 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 RPL10AP62906 217 aaKnown RBP13.05□□□□□ -0.32
TGFB1-204ENST00000600196 ROR1Q01973 937 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 DUSP6Q16828 381 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 GJB7Q6PEY0 223 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 PRSS55Q6UWB4 352 aaPredicted RBP13.05□□□□□ -0.32
TGFB1-204ENST00000600196 SCARA5Q6ZMJ2 495 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 IRF2BP2Q7Z5L9 587 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 SPATA2LQ8IUW3 424 aaPredicted RBP13.05□□□□□ -0.32
TGFB1-204ENST00000600196 TMEM130Q8N3G9 435 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 SLC22A17Q8WUG5 538 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 ZNF606Q8WXB4 792 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 KAT5Q92993 513 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 C8orf48Q96LL4 319 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 GAS2L1Q99501 681 aaPredicted RBP13.05□□□□□ -0.32
TGFB1-204ENST00000600196 MIS12Q9H081 205 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 TLE6Q9H808 572 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 CSNK1G1Q9HCP0 422 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 NLRC4Q9NPP4 1024 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 HESX1Q9UBX0 185 aa13.05□□□□□ -0.32
TGFB1-204ENST00000600196 VWA8A3KMH1 1905 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 MYBPHLA2RUH7 354 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 TRIM66O15016 1216 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 CYP26A1O43174 497 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 MFAP3LO75121 409 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 CLASP2O75122 1294 aaKnown RBP13.04□□□□□ -0.32
TGFB1-204ENST00000600196 LSM8O95777 96 aaKnown RBP13.04□□□□□ -0.32
TGFB1-204ENST00000600196 SERPING1P05155 500 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 PDGFRBP09619 1106 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 HNRNPA1P09651 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
TGFB1-204ENST00000600196 CPB1P15086 417 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 HOXB8P17481 243 aaPredicted RBP13.04□□□□□ -0.32
TGFB1-204ENST00000600196 GNA15P30679 374 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 CASP14P31944 242 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 RAP1GAPP47736 663 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 PDE6CP51160 858 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 CLCN4P51793 760 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 KCNC3Q14003 757 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 TMC6Q7Z403 805 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 ACOT1Q86TX2 421 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 LRRTM3Q86VH5 581 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 VPS36Q86VN1 386 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 SCML4Q8N228 414 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 CMASQ8NFW8 434 aaPredicted RBP13.04□□□□□ -0.32
TGFB1-204ENST00000600196 CASP10Q92851 521 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 SMARCD1Q96GM5 515 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 PCED1BQ96HM7 432 aa13.04□□□□□ -0.32
TGFB1-204ENST00000600196 SPATA17Q96L03 361 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms